建立哈洛单胞菌 YK44 的优化电穿孔方法及其在 PHB 和异丁醇共生中的应用

IF 2.5 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
{"title":"建立哈洛单胞菌 YK44 的优化电穿孔方法及其在 PHB 和异丁醇共生中的应用","authors":"","doi":"10.1007/s12257-024-00055-z","DOIUrl":null,"url":null,"abstract":"<h3>Abstract</h3> <p>Many <em>Halomonas</em> spp. thrive in high-salinity environments, and their resistance to high salt levels allows for their cultivation in non-sterile conditions. Despite their robustness and potential poly (3-hydroxybutyrate) (PHB) production capability, there are relatively few reports on the engineering of various <em>Halomonas</em> species, and there are still some difficulties in genetically engineering novel <em>Halomonas</em> strains. In particular, conjugation as a transformation method has been employed more frequently than electroporation in <em>Halomonas</em>; however, electroporation is necessary for the accelerated engineering of <em>Halomonas</em> and increased time efficiency. To touch this issue, we collected <em>Halomonas</em> strains and evaluated their PHB production and electroporation efficiencies resulting that the <em>Halomonas</em> sp. YK44 showed the highest electroporation efficiency with high PHB production among the various <em>Halomonas</em> strains. A series of electroporation protocol optimization experiments were conducted to identify optimal conditions for <em>Halomonas</em> sp. YK44 such as main culturing for 10 h, utilizing a DNA concentration of 150–200 μg/mL, and performing electroporation at 2.1 kV, followed by a washing step using 10% glycerol and a recovery period of 36 h with pBBR1MCS2. By introducing isobutanol biosynthetic genes using an optimized electroporation protocol, the highest isobutanol production was obtained at 196 mg/L with 63% PHB content simultaneously and the higher PHB production was obtained at 6.6 g/L with 152 mg/L isobutanol. Our approach showed the overall process to identify a suitable <em>Halomonas</em> host by applying general electroporation methods, optimizing electroporation protocols, and demonstrated the first coproduction of PHB and isobutanol in <em>Halomonas</em>.</p>","PeriodicalId":8936,"journal":{"name":"Biotechnology and Bioprocess Engineering","volume":null,"pages":null},"PeriodicalIF":2.5000,"publicationDate":"2024-03-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Establishment of an optimized electroporation method for Halomonas sp. YK44 and its application in the coproduction of PHB and isobutanol\",\"authors\":\"\",\"doi\":\"10.1007/s12257-024-00055-z\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<h3>Abstract</h3> <p>Many <em>Halomonas</em> spp. thrive in high-salinity environments, and their resistance to high salt levels allows for their cultivation in non-sterile conditions. Despite their robustness and potential poly (3-hydroxybutyrate) (PHB) production capability, there are relatively few reports on the engineering of various <em>Halomonas</em> species, and there are still some difficulties in genetically engineering novel <em>Halomonas</em> strains. In particular, conjugation as a transformation method has been employed more frequently than electroporation in <em>Halomonas</em>; however, electroporation is necessary for the accelerated engineering of <em>Halomonas</em> and increased time efficiency. To touch this issue, we collected <em>Halomonas</em> strains and evaluated their PHB production and electroporation efficiencies resulting that the <em>Halomonas</em> sp. YK44 showed the highest electroporation efficiency with high PHB production among the various <em>Halomonas</em> strains. A series of electroporation protocol optimization experiments were conducted to identify optimal conditions for <em>Halomonas</em> sp. YK44 such as main culturing for 10 h, utilizing a DNA concentration of 150–200 μg/mL, and performing electroporation at 2.1 kV, followed by a washing step using 10% glycerol and a recovery period of 36 h with pBBR1MCS2. By introducing isobutanol biosynthetic genes using an optimized electroporation protocol, the highest isobutanol production was obtained at 196 mg/L with 63% PHB content simultaneously and the higher PHB production was obtained at 6.6 g/L with 152 mg/L isobutanol. Our approach showed the overall process to identify a suitable <em>Halomonas</em> host by applying general electroporation methods, optimizing electroporation protocols, and demonstrated the first coproduction of PHB and isobutanol in <em>Halomonas</em>.</p>\",\"PeriodicalId\":8936,\"journal\":{\"name\":\"Biotechnology and Bioprocess Engineering\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.5000,\"publicationDate\":\"2024-03-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biotechnology and Bioprocess Engineering\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1007/s12257-024-00055-z\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biotechnology and Bioprocess Engineering","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1007/s12257-024-00055-z","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

摘要 许多哈洛单胞菌属在高盐度环境中茁壮成长,它们对高盐度的抗性使其可以在非无菌条件下培养。尽管卤单胞菌具有很强的生命力和潜在的聚(3-羟基丁酸)(PHB)生产能力,但有关各种卤单胞菌工程学的报道相对较少,而且在对新型卤单胞菌菌株进行基因工程方面仍存在一些困难。其中,共轭转化法比电穿孔法在卤单胞菌中应用得更多,但电穿孔法是加速卤单胞菌工程化和提高时间效率所必需的。为了解决这个问题,我们收集了哈洛单胞菌菌株,并评估了它们的 PHB 产量和电穿孔效率,结果发现在各种哈洛单胞菌菌株中,YK44 哈洛单胞菌的电穿孔效率最高,PHB 产量也很高。为了确定光单胞菌 YK44 的最佳电穿孔条件,我们进行了一系列电穿孔方案优化实验,如主培养 10 小时,使用 150-200 μg/mL 的 DNA 浓度,在 2.1 kV 电压下进行电穿孔,然后使用 10%甘油进行洗涤,pBBR1MCS2 的恢复期为 36 小时。通过使用优化的电穿孔方案引入异丁醇生物合成基因,异丁醇产量最高,为 196 mg/L,PHB 含量为 63%;PHB 产量较高,为 6.6 g/L,异丁醇含量为 152 mg/L。我们的方法展示了通过应用一般电穿孔方法、优化电穿孔方案来确定合适的哈洛单胞菌宿主的整个过程,并首次在哈洛单胞菌中展示了 PHB 和异丁醇的共生。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Establishment of an optimized electroporation method for Halomonas sp. YK44 and its application in the coproduction of PHB and isobutanol

Abstract

Many Halomonas spp. thrive in high-salinity environments, and their resistance to high salt levels allows for their cultivation in non-sterile conditions. Despite their robustness and potential poly (3-hydroxybutyrate) (PHB) production capability, there are relatively few reports on the engineering of various Halomonas species, and there are still some difficulties in genetically engineering novel Halomonas strains. In particular, conjugation as a transformation method has been employed more frequently than electroporation in Halomonas; however, electroporation is necessary for the accelerated engineering of Halomonas and increased time efficiency. To touch this issue, we collected Halomonas strains and evaluated their PHB production and electroporation efficiencies resulting that the Halomonas sp. YK44 showed the highest electroporation efficiency with high PHB production among the various Halomonas strains. A series of electroporation protocol optimization experiments were conducted to identify optimal conditions for Halomonas sp. YK44 such as main culturing for 10 h, utilizing a DNA concentration of 150–200 μg/mL, and performing electroporation at 2.1 kV, followed by a washing step using 10% glycerol and a recovery period of 36 h with pBBR1MCS2. By introducing isobutanol biosynthetic genes using an optimized electroporation protocol, the highest isobutanol production was obtained at 196 mg/L with 63% PHB content simultaneously and the higher PHB production was obtained at 6.6 g/L with 152 mg/L isobutanol. Our approach showed the overall process to identify a suitable Halomonas host by applying general electroporation methods, optimizing electroporation protocols, and demonstrated the first coproduction of PHB and isobutanol in Halomonas.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Biotechnology and Bioprocess Engineering
Biotechnology and Bioprocess Engineering 工程技术-生物工程与应用微生物
CiteScore
5.00
自引率
12.50%
发文量
79
审稿时长
3 months
期刊介绍: Biotechnology and Bioprocess Engineering is an international bimonthly journal published by the Korean Society for Biotechnology and Bioengineering. BBE is devoted to the advancement in science and technology in the wide area of biotechnology, bioengineering, and (bio)medical engineering. This includes but is not limited to applied molecular and cell biology, engineered biocatalysis and biotransformation, metabolic engineering and systems biology, bioseparation and bioprocess engineering, cell culture technology, environmental and food biotechnology, pharmaceutics and biopharmaceutics, biomaterials engineering, nanobiotechnology, and biosensor and bioelectronics.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信