Parelaphostrongylus tenuis 的全新全基因组组装和注释。

IF 1.4 4区生物学 Q2 ZOOLOGY

Journal of nematology Pub Date : 2024-03-14 eCollection Date: 2024-03-01 DOI:10.2478/jofnem-2024-0009

Tyler J Garwood, Jessie E Richards, Marissa G Macchietto, Richard W Gerhold, Stephen A Kania, John R Garbe, Nicholas M Fountain-Jones, Peter A Larsen, Tiffany M Wolf

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引用次数: 0

摘要

Parelaphostrongylus tenuis 会导致北美东部和中部的无脊椎动物发病和死亡，但目前还没有参考基因组序列来促进研究。在此，我们介绍利用 PacBio 和 Illumina 技术生成的 P. tenuis 基因组组装和注释。该基因组有 491 Mbp，7285 个支架和 185 kb N50。

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A De Novo Whole Genome Assembly and Annotation of Parelaphostrongylus tenuis.

Parelaphostrongylus tenuis causes ungulate morbidity and mortality in eastern and central North America, but no reference genome sequence exists to facilitate research. Here, we present a P. tenuis genome assembly and annotation, generated with PacBio and Illumina technologies. The assembly is 491 Mbp, with 7285 scaffolds and 185 kb N50.

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来源期刊

Journal of nematology 生物-动物学

CiteScore

2.90

自引率

7.70%

发文量

审稿时长

14 weeks

期刊介绍： Journal of Nematology is the official technical and scientific communication publication of the Society of Nematologists since 1969. The journal publishes original papers on all aspects of basic, applied, descriptive, theoretical or experimental nematology and adheres to strict peer-review policy. Other categories of papers include invited reviews, research notes, abstracts of papers presented at annual meetings, and special publications as appropriate.