Carla du Toit , Megan Hutter , Igor Gyacskov , David Tessier , Robert Dima , Aaron Fenster , Emily Lalone
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Absolute and signed performance metrics were computed, and segmentation performance was compared between the manual segmentations of raters 1 and 2.</p></div><div><h3>Results</h3><p>Results of the U-Net-based run were mean 3D DSC 86.9 ± 4.8%, recall 93.7 ± 3.6%, precision 81.1 ± 6.9%, volume percent difference 16.9 ± 10.2%, mean surface distance 0.18 ± 0.04 mm, and Hausdorff distance 1.8 ± 0.8 mm. The algorithm demonstrated an overall increase in performance after 3D segmentation reconstruction compared to 2D predictions, but the difference was not statistically significant.</p></div><div><h3>Conclusion</h3><p>This study investigated the use of a modified U-Net algorithm to automatically segment the synovial tissue volume (STV) of CMC1 OA patients and demonstrated that the addition of this deep learning method increases the efficiency of STV estimations in clinical trial settings.</p></div>","PeriodicalId":74378,"journal":{"name":"Osteoarthritis imaging","volume":"4 1","pages":"Article 100176"},"PeriodicalIF":0.0000,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772654124000047/pdfft?md5=258902f12af0b007d11a88bd356be196&pid=1-s2.0-S2772654124000047-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Deep learning for synovial volume segmentation of the first carpometacarpal joint in osteoarthritis patients\",\"authors\":\"Carla du Toit , Megan Hutter , Igor Gyacskov , David Tessier , Robert Dima , Aaron Fenster , Emily Lalone\",\"doi\":\"10.1016/j.ostima.2024.100176\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Objective</h3><p>The objective of this study was to develop a deep-learning-based approach to automatically segment 3D ultrasound images of the synovial tissue in osteoarthritis of the first carpometacarpal (CMC1 OA).</p></div><div><h3>Design</h3><p>Deep learning predictions on 2D ultrasound slices sampled in the transverse plane were used to view the synovial tissue of the first carpometacarpal in patients with OA, followed by reconstruction into 3D surfaces. A modified 2D U-Net was trained using a dataset of 832 2D US images resliced from 89 3D US images. Segmentation accuracy was evaluated using a testing dataset of 208 2D US images resliced from 15 3D US images. Absolute and signed performance metrics were computed, and segmentation performance was compared between the manual segmentations of raters 1 and 2.</p></div><div><h3>Results</h3><p>Results of the U-Net-based run were mean 3D DSC 86.9 ± 4.8%, recall 93.7 ± 3.6%, precision 81.1 ± 6.9%, volume percent difference 16.9 ± 10.2%, mean surface distance 0.18 ± 0.04 mm, and Hausdorff distance 1.8 ± 0.8 mm. 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引用次数: 0
摘要
本研究旨在开发一种基于深度学习的方法,用于自动分割第一腕掌骨关节炎(CMC1 OA)滑膜组织的三维超声图像。设计采用深度学习预测横向平面采样的二维超声切片,观察 OA 患者的第一腕掌滑膜组织,然后将其重建为三维表面。使用从 89 幅三维 US 图像中重新切片的 832 幅二维 US 图像数据集,对改进的二维 U-Net 进行了训练。使用从 15 幅三维 US 图像重新切片的 208 幅二维 US 图像的测试数据集评估了分段准确性。结果基于 U-Net 的运行结果为:平均 3D DSC 86.9 ± 4.8%,召回率 93.7 ± 3.6%,精确度 81.1 ± 6.9%,体积百分比差异 16.9 ± 10.2%,平均表面距离 0.18 ± 0.04 mm,豪斯多夫距离 1.8 ± 0.8 mm。与二维预测相比,该算法在三维分割重建后的性能总体上有所提高,但差异不具有统计学意义。结论本研究调查了使用改进的 U-Net 算法自动分割 CMC1 OA 患者滑膜组织体积(STV)的情况,结果表明,在临床试验环境中,添加这种深度学习方法可提高 STV 估算的效率。
Deep learning for synovial volume segmentation of the first carpometacarpal joint in osteoarthritis patients
Objective
The objective of this study was to develop a deep-learning-based approach to automatically segment 3D ultrasound images of the synovial tissue in osteoarthritis of the first carpometacarpal (CMC1 OA).
Design
Deep learning predictions on 2D ultrasound slices sampled in the transverse plane were used to view the synovial tissue of the first carpometacarpal in patients with OA, followed by reconstruction into 3D surfaces. A modified 2D U-Net was trained using a dataset of 832 2D US images resliced from 89 3D US images. Segmentation accuracy was evaluated using a testing dataset of 208 2D US images resliced from 15 3D US images. Absolute and signed performance metrics were computed, and segmentation performance was compared between the manual segmentations of raters 1 and 2.
Results
Results of the U-Net-based run were mean 3D DSC 86.9 ± 4.8%, recall 93.7 ± 3.6%, precision 81.1 ± 6.9%, volume percent difference 16.9 ± 10.2%, mean surface distance 0.18 ± 0.04 mm, and Hausdorff distance 1.8 ± 0.8 mm. The algorithm demonstrated an overall increase in performance after 3D segmentation reconstruction compared to 2D predictions, but the difference was not statistically significant.
Conclusion
This study investigated the use of a modified U-Net algorithm to automatically segment the synovial tissue volume (STV) of CMC1 OA patients and demonstrated that the addition of this deep learning method increases the efficiency of STV estimations in clinical trial settings.