肺动脉高压钙通道调控相关基因的机制研究及诊断特征。

IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Molecular Biotechnology Pub Date : 2025-03-01 Epub Date: 2024-03-09 DOI:10.1007/s12033-024-01112-x
Dongjuan Chen, Jun Yang, Ting Zhang, Xuemei Li, Qiliang Xiong, Shaofeng Jiang, Chen Yi
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引用次数: 0

摘要

肺动脉高压(PAH)是一种严重的心肺疾病,病因复杂。长期以来,钙通道阻滞剂一直被用于治疗。我们的研究旨在验证显示 PAH 患者体内钙离子浓度增加的实验结果。我们研究了与钙通道调节相关的基因对 PAH 发病的影响,并建立了一个准确的诊断模型。我们对 18 名健康人和 18 名 PAH 患者血清中的临床试验数据进行了回顾性分析。测定并比较了钙离子和钾离子的浓度。检索数据集,选择与钙离子释放相关的基因。R 软件包处理了数据集,过滤了 174 个常见基因,并进行了基因本体和京都基因与基因组百科全书的富集分析。确定了六个中心基因,并构建了提名图和逻辑回归预测模型。随机森林过滤交叉基因,并利用人工神经网络建立和验证了诊断模型。与钙离子相关的 174 个交叉基因显示出与生物过程、细胞成分和分子功能的显著相关性。通过构建蛋白质-蛋白质相互作用网络,获得了六个关键基因。利用神经网络算法建立的诊断模型具有较高的准确率(> 90%)和诊断能力(AUC = 0.98)。这项研究验证了实验结果,确定了与钙离子相关的关键基因,并利用神经网络算法建立了一个高准确度的诊断模型。这些发现深入揭示了钙离子释放基因在 PAH 中的作用,并证明了该诊断模型在临床应用中的潜力。然而,由于样本量的限制和预后数据的缺乏,PAH 患者体内钙离子的调控机制及其对 PAH 患者临床预后的影响仍有待进一步探索。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Mechanistic Investigation of Calcium Channel Regulation-Associated Genes in Pulmonary Arterial Hypertension and Signatures for Diagnosis.

Mechanistic Investigation of Calcium Channel Regulation-Associated Genes in Pulmonary Arterial Hypertension and Signatures for Diagnosis.

Pulmonary arterial hypertension (PAH) is a severe cardiopulmonary disorder with complex causes. Calcium channel blockers have long been used in its treatment. Our study aimed to validate experimental results showing increased calcium ion concentration in PAH patients. We investigated the impact of genes related to calcium channel regulation on PAH development and developed an accurate diagnostic model. Clinical trial data from serum of 18 healthy individuals and 18 patients with PAH were retrospectively analyzed. Concentrations of calcium and potassium ions were determined and compared. Datasets were retrieved, selecting genes associated with calcium ion release. R packages processed the datasets, filtering 174 common genes, and conducting Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analyses. Six hub genes were identified, and nomogram and logistic regression prediction models were constructed. Random forest filtered cross genes, and a diagnostic model was developed and validated using an artificial neural network. The 174 intersection genes related to calcium ions showed significant correlations with biological processes, cellular components, and molecular functions. Six key genes were obtained by constructing a protein-protein interaction network. A diagnostic model with high accuracy (> 90%) and diagnostic capability (AUC = 0.98) was established using a neural network algorithm. This study validated the experimental results, identified key genes associated with calcium ions, and developed a highly accurate diagnostic model using a neural network algorithm. These findings provide insights into the role of calcium release genes in PAH and demonstrate the potential of the diagnostic model for clinical application. However, due to limitations in sample size and a lack of prognosis data, the regulatory mechanisms of calcium ions in PAH patients and their impact on the clinical prognosis of PAH patients still need further exploration in the future.

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来源期刊
Molecular Biotechnology
Molecular Biotechnology 医学-生化与分子生物学
CiteScore
4.10
自引率
3.80%
发文量
165
审稿时长
6 months
期刊介绍: Molecular Biotechnology publishes original research papers on the application of molecular biology to both basic and applied research in the field of biotechnology. Particular areas of interest include the following: stability and expression of cloned gene products, cell transformation, gene cloning systems and the production of recombinant proteins, protein purification and analysis, transgenic species, developmental biology, mutation analysis, the applications of DNA fingerprinting, RNA interference, and PCR technology, microarray technology, proteomics, mass spectrometry, bioinformatics, plant molecular biology, microbial genetics, gene probes and the diagnosis of disease, pharmaceutical and health care products, therapeutic agents, vaccines, gene targeting, gene therapy, stem cell technology and tissue engineering, antisense technology, protein engineering and enzyme technology, monoclonal antibodies, glycobiology and glycomics, and agricultural biotechnology.
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