Oceanimonas pelagia sp.

IF 1.8 3区 生物学 Q4 MICROBIOLOGY
Hsiao-Tsu Yang, Yi-Hsuan Huang, Ying-Ning Ho
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引用次数: 0

摘要

从台湾北部海岸的海洋沉积物中分离出一株海洋细菌,命名为 NTOU-MSR1T。该细菌为革兰氏阴性,需氧,能运动,有单个鞭毛。它的杆状细胞宽约 0.5-0.6 微米,长约 1.8-2.0 微米。NTOU-MSR1T 的生长温度为 10 至 45 °C,最佳生长温度为 30 °C。生长的 pH 值范围为 7.0-10.0,最佳生长 pH 值为 7.0-8.0。它能耐受高达 12% 的 NaCl 浓度。细胞膜主要含有 C16:1ω7c、C18:1ω7c 和 C16:0 等脂肪酸。总体基因组亲缘关系指数表明,与最亲缘的物种 O. marisflavi 102-Na3T 相比,菌株 NTOU-MSR1T 的平均核苷酸同一性(ANI)为 87.88%,数字 DNA-DNA 杂交(dDDH)值为 35.40%。这些数值分别低于物种划分的 95% 和 70% 临界值。这些结果表明,NTOU-MSR1T菌株是海洋鲑属的新成员。其基因组 DNA 的 G + C 含量为 61.0 摩尔%。基因组分析显示,其基因与降解多环芳烃的β-酮基二酸途径儿茶酚分支、抗重金属、多羟基丁酸的生物合成以及消化甲壳素和聚糖的糖苷水解酶(GH19、GH23 和 GH103)的产生有关。此外,NTOU-MSR1T 还能合成生物表面活性剂,并可能降解塑料。该新物种的拟命名为海洋贻贝(Oceanimonas pelagia),模式菌株命名为 NTOU-MSR1T(= BCRC 81403T = JCM 36023T)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Oceanimonas pelagia sp. nov., a novel biosurfactant-producing and plastic-degrading potential bacterium isolated from marine coastal sediment.

Oceanimonas pelagia sp. nov., a novel biosurfactant-producing and plastic-degrading potential bacterium isolated from marine coastal sediment.

A marine bacterial strain, named NTOU-MSR1T, was isolated from marine sediment of northern coast of Taiwan. This bacterium was Gram-stain-negative, aerobic, and motile, with a single flagellum. Its rod-shaped cells measured approximately 0.5-0.6 µm in width and 1.8-2.0 μm in length. NTOU-MSR1T grew at temperatures ranging from 10 to 45 °C, optimally at 30 °C. The pH range for growth was 7.0-10.0, with optimal growth at pH 7.0-8.0. It tolerated NaCl concentrations up to 12%. The cell membrane predominantly contained fatty acids such C16:1ω7c, C18:1ω7c, and C16:0. The overall genome relatedness indices indicated that strain NTOU-MSR1T had an average nucleotide identity (ANI) of 87.88% and a digital DNA-DNA hybridization (dDDH) value of 35.40% compared to its closest related species, O. marisflavi 102-Na3T. These values fell below the 95% and 70% threshold for species delineation, respectively. These findings suggested that the strain NTOU-MSR1T was a new member of the Oceanimonas genus. Its genomic DNA had a G + C content of 61.0 mol%. Genomic analysis revealed genes associated with the catechol branch of β- ketoadipate pathway for degrading polycyclic aromatic hydrocarbons, resistance to heavy metal, biosynthesis of polyhydroxybutyrate and the production of glycoside hydrolases (GH19, GH23, and GH103) for chitin and glycan digestion. Additionally, NTOU-MSR1T was capable of synthesizing biosurfactants and potentially degrading plastic. The proposed name for this new species is Oceanimonas pelagia, with the type strain designated as NTOU-MSR1T (= BCRC 81403T = JCM 36023T).

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来源期刊
CiteScore
5.60
自引率
11.50%
发文量
104
审稿时长
3 months
期刊介绍: Antonie van Leeuwenhoek publishes papers on fundamental and applied aspects of microbiology. Topics of particular interest include: taxonomy, structure & development; biochemistry & molecular biology; physiology & metabolic studies; genetics; ecological studies; especially molecular ecology; marine microbiology; medical microbiology; molecular biological aspects of microbial pathogenesis and bioinformatics.
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