Imran Khan , Uzma Khan , Wajiha Khan , Aljawharah Alqathama , Muhammad Riaz , Rizwan Ahmad , Mohammad Mahtab Alam
{"title":"利用 HPLC-ESI-Q-TOF-MS 表征鲁梅克斯牙根提取物的抗菌和抗生物膜潜力","authors":"Imran Khan , Uzma Khan , Wajiha Khan , Aljawharah Alqathama , Muhammad Riaz , Rizwan Ahmad , Mohammad Mahtab Alam","doi":"10.1016/j.sjbs.2024.103962","DOIUrl":null,"url":null,"abstract":"<div><p>The control of infections is one of the key strategies to treat the above mention conditions. In this study the folkloric use of <em>Rumex dentatus</em> (<em>R. dentatus</em>) roots in various conditions like cuts, wounds, lung, and skin infections was scientifically investigated. The methanolic (MeOH) crude extract of <em>R. dentatus</em> root was fractionated (n-hexane, ethyl acetate and water) via bioassay-guided method, and its antibacterial activity was evaluated using the agar well diffusion and Minimum inhibitory concentration (MIC) assays against clinical isolate of <em>Pseudomonas aeruginosa</em> (<em>P. aeruginosa</em>). The antibiofilm activity was measured using the crystal violet staining method. The crude extract, fractions and sub-fractions tested showed the MICs values ranging from 200 to 1000 μg/mL respectively. Among the fractions, notably, the water fraction exhibited the highest activity against <em>P. aeruginosa</em>. The water fraction was then subjected to thin layer chromatography (TLC). Following spectrometric analysis using HPLC-ESI-Q-TOF-MS, gallic acid and emodin were identified as the primary components within the same fraction, responsible for eliciting antibacterial and antibiofilm effects. The in-silico studies conducted with AutoDock Vina on the LasR protein, using both isolated gallic acid and emodin, confirm the binding affinity of these molecules to the active sites of the LasR protein that has regulatory role in building of biofilm formation and its pathogenicity. By scientifically validating the infection-controlling properties of <em>R. dentatus</em>, this research provides compelling evidence that supports its traditional use as reported in folklore. Moreover, this study contributes to our understanding of the plant's potential in managing infections, thereby substantiating its traditional therapeutic application in a scientific context.</p></div>","PeriodicalId":21540,"journal":{"name":"Saudi Journal of Biological Sciences","volume":"31 4","pages":"Article 103962"},"PeriodicalIF":4.4000,"publicationDate":"2024-02-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319562X24000408/pdfft?md5=0be39d7cad4d80d8a7efe85a080e7d8a&pid=1-s2.0-S1319562X24000408-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Antibacterial and antibiofilm potentials of Rumex dentatus root extract characterized by HPLC-ESI-Q-TOF-MS\",\"authors\":\"Imran Khan , Uzma Khan , Wajiha Khan , Aljawharah Alqathama , Muhammad Riaz , Rizwan Ahmad , Mohammad Mahtab Alam\",\"doi\":\"10.1016/j.sjbs.2024.103962\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The control of infections is one of the key strategies to treat the above mention conditions. In this study the folkloric use of <em>Rumex dentatus</em> (<em>R. dentatus</em>) roots in various conditions like cuts, wounds, lung, and skin infections was scientifically investigated. The methanolic (MeOH) crude extract of <em>R. dentatus</em> root was fractionated (n-hexane, ethyl acetate and water) via bioassay-guided method, and its antibacterial activity was evaluated using the agar well diffusion and Minimum inhibitory concentration (MIC) assays against clinical isolate of <em>Pseudomonas aeruginosa</em> (<em>P. aeruginosa</em>). The antibiofilm activity was measured using the crystal violet staining method. The crude extract, fractions and sub-fractions tested showed the MICs values ranging from 200 to 1000 μg/mL respectively. Among the fractions, notably, the water fraction exhibited the highest activity against <em>P. aeruginosa</em>. The water fraction was then subjected to thin layer chromatography (TLC). Following spectrometric analysis using HPLC-ESI-Q-TOF-MS, gallic acid and emodin were identified as the primary components within the same fraction, responsible for eliciting antibacterial and antibiofilm effects. The in-silico studies conducted with AutoDock Vina on the LasR protein, using both isolated gallic acid and emodin, confirm the binding affinity of these molecules to the active sites of the LasR protein that has regulatory role in building of biofilm formation and its pathogenicity. By scientifically validating the infection-controlling properties of <em>R. dentatus</em>, this research provides compelling evidence that supports its traditional use as reported in folklore. Moreover, this study contributes to our understanding of the plant's potential in managing infections, thereby substantiating its traditional therapeutic application in a scientific context.</p></div>\",\"PeriodicalId\":21540,\"journal\":{\"name\":\"Saudi Journal of Biological Sciences\",\"volume\":\"31 4\",\"pages\":\"Article 103962\"},\"PeriodicalIF\":4.4000,\"publicationDate\":\"2024-02-18\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S1319562X24000408/pdfft?md5=0be39d7cad4d80d8a7efe85a080e7d8a&pid=1-s2.0-S1319562X24000408-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Saudi Journal of Biological Sciences\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1319562X24000408\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"Agricultural and Biological Sciences\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Saudi Journal of Biological Sciences","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1319562X24000408","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
Antibacterial and antibiofilm potentials of Rumex dentatus root extract characterized by HPLC-ESI-Q-TOF-MS
The control of infections is one of the key strategies to treat the above mention conditions. In this study the folkloric use of Rumex dentatus (R. dentatus) roots in various conditions like cuts, wounds, lung, and skin infections was scientifically investigated. The methanolic (MeOH) crude extract of R. dentatus root was fractionated (n-hexane, ethyl acetate and water) via bioassay-guided method, and its antibacterial activity was evaluated using the agar well diffusion and Minimum inhibitory concentration (MIC) assays against clinical isolate of Pseudomonas aeruginosa (P. aeruginosa). The antibiofilm activity was measured using the crystal violet staining method. The crude extract, fractions and sub-fractions tested showed the MICs values ranging from 200 to 1000 μg/mL respectively. Among the fractions, notably, the water fraction exhibited the highest activity against P. aeruginosa. The water fraction was then subjected to thin layer chromatography (TLC). Following spectrometric analysis using HPLC-ESI-Q-TOF-MS, gallic acid and emodin were identified as the primary components within the same fraction, responsible for eliciting antibacterial and antibiofilm effects. The in-silico studies conducted with AutoDock Vina on the LasR protein, using both isolated gallic acid and emodin, confirm the binding affinity of these molecules to the active sites of the LasR protein that has regulatory role in building of biofilm formation and its pathogenicity. By scientifically validating the infection-controlling properties of R. dentatus, this research provides compelling evidence that supports its traditional use as reported in folklore. Moreover, this study contributes to our understanding of the plant's potential in managing infections, thereby substantiating its traditional therapeutic application in a scientific context.
期刊介绍:
Saudi Journal of Biological Sciences is an English language, peer-reviewed scholarly publication in the area of biological sciences. Saudi Journal of Biological Sciences publishes original papers, reviews and short communications on, but not limited to:
• Biology, Ecology and Ecosystems, Environmental and Biodiversity
• Conservation
• Microbiology
• Physiology
• Genetics and Epidemiology
Saudi Journal of Biological Sciences is the official publication of the Saudi Society for Biological Sciences and is published by King Saud University in collaboration with Elsevier and is edited by an international group of eminent researchers.