Haoran Zhang, Zonglin Wang, Yilan Song, Fanxue Zhang, Lelei Wen, Rong Xiao, Daochao Jin
{"title":"狼蛛 Pardosa pseudoannulata(Araneae: Lycosidae)对温度胁迫的微RNA响应","authors":"Haoran Zhang, Zonglin Wang, Yilan Song, Fanxue Zhang, Lelei Wen, Rong Xiao, Daochao Jin","doi":"10.1111/1748-5967.12714","DOIUrl":null,"url":null,"abstract":"<p>MicroRNAs (miRNAs) are conserved noncoding small RNAs that play essential regulatory roles in gene function by regulating target genes. <i>Pardosa pseudoannulata</i> is an important natural predatory enemy of insect pests and plays a significant role in controlling pests in rice fields, with temperature having a significant impact on their growth and development. To understand the response of miRNAs to temperature stress in <i>P. pseudoannulata</i>, we performed miRNA identification analyses of adult spiders exposed to 10°C and 40°C for 12 h, as low-temperature and high-temperature treatment groups, respectively. We obtained 54.74 M clean reads from 69.84 M raw reads after filtering out low-quality reads, and 78 miRNAs including 13 novel miRNAs were identified from three small RNA libraries (10°C, 25°C and 40°C). At the low temperature and the high temperature, eight (one upregulated and seven downregulated) and ten (nine upregulated and one downregulated) differentially expressed miRNAs were identified, respectively. These differentially expressed miRNAs negatively regulated 43 and 12 target mRNA (the unigenes in our previous transcriptome sequence data) in response to low- and high-temperature stress, respectively. These target genes are mainly involved in translation, ribosome structure and biotransformation, as well as the generation and conversion of energy. This study represents the first report of miRNA identification related to the Araneae spider species in response to temperature stress. These results will greatly facilitate our understanding of the physiological and biochemical mechanisms of spiders in response to temperature stress, which might be beneficial for the conservation and utilization of this species as an important natural insect enemy of pests in rice ecosystems.</p>","PeriodicalId":11776,"journal":{"name":"Entomological Research","volume":"54 2","pages":""},"PeriodicalIF":1.2000,"publicationDate":"2024-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"MicroRNA response to temperature stress in the wolf spider Pardosa pseudoannulata (Araneae: Lycosidae)\",\"authors\":\"Haoran Zhang, Zonglin Wang, Yilan Song, Fanxue Zhang, Lelei Wen, Rong Xiao, Daochao Jin\",\"doi\":\"10.1111/1748-5967.12714\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>MicroRNAs (miRNAs) are conserved noncoding small RNAs that play essential regulatory roles in gene function by regulating target genes. <i>Pardosa pseudoannulata</i> is an important natural predatory enemy of insect pests and plays a significant role in controlling pests in rice fields, with temperature having a significant impact on their growth and development. To understand the response of miRNAs to temperature stress in <i>P. pseudoannulata</i>, we performed miRNA identification analyses of adult spiders exposed to 10°C and 40°C for 12 h, as low-temperature and high-temperature treatment groups, respectively. We obtained 54.74 M clean reads from 69.84 M raw reads after filtering out low-quality reads, and 78 miRNAs including 13 novel miRNAs were identified from three small RNA libraries (10°C, 25°C and 40°C). At the low temperature and the high temperature, eight (one upregulated and seven downregulated) and ten (nine upregulated and one downregulated) differentially expressed miRNAs were identified, respectively. These differentially expressed miRNAs negatively regulated 43 and 12 target mRNA (the unigenes in our previous transcriptome sequence data) in response to low- and high-temperature stress, respectively. These target genes are mainly involved in translation, ribosome structure and biotransformation, as well as the generation and conversion of energy. This study represents the first report of miRNA identification related to the Araneae spider species in response to temperature stress. These results will greatly facilitate our understanding of the physiological and biochemical mechanisms of spiders in response to temperature stress, which might be beneficial for the conservation and utilization of this species as an important natural insect enemy of pests in rice ecosystems.</p>\",\"PeriodicalId\":11776,\"journal\":{\"name\":\"Entomological Research\",\"volume\":\"54 2\",\"pages\":\"\"},\"PeriodicalIF\":1.2000,\"publicationDate\":\"2024-02-20\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Entomological Research\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/1748-5967.12714\",\"RegionNum\":4,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"ENTOMOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Entomological Research","FirstCategoryId":"97","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/1748-5967.12714","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"ENTOMOLOGY","Score":null,"Total":0}
MicroRNA response to temperature stress in the wolf spider Pardosa pseudoannulata (Araneae: Lycosidae)
MicroRNAs (miRNAs) are conserved noncoding small RNAs that play essential regulatory roles in gene function by regulating target genes. Pardosa pseudoannulata is an important natural predatory enemy of insect pests and plays a significant role in controlling pests in rice fields, with temperature having a significant impact on their growth and development. To understand the response of miRNAs to temperature stress in P. pseudoannulata, we performed miRNA identification analyses of adult spiders exposed to 10°C and 40°C for 12 h, as low-temperature and high-temperature treatment groups, respectively. We obtained 54.74 M clean reads from 69.84 M raw reads after filtering out low-quality reads, and 78 miRNAs including 13 novel miRNAs were identified from three small RNA libraries (10°C, 25°C and 40°C). At the low temperature and the high temperature, eight (one upregulated and seven downregulated) and ten (nine upregulated and one downregulated) differentially expressed miRNAs were identified, respectively. These differentially expressed miRNAs negatively regulated 43 and 12 target mRNA (the unigenes in our previous transcriptome sequence data) in response to low- and high-temperature stress, respectively. These target genes are mainly involved in translation, ribosome structure and biotransformation, as well as the generation and conversion of energy. This study represents the first report of miRNA identification related to the Araneae spider species in response to temperature stress. These results will greatly facilitate our understanding of the physiological and biochemical mechanisms of spiders in response to temperature stress, which might be beneficial for the conservation and utilization of this species as an important natural insect enemy of pests in rice ecosystems.
期刊介绍:
Entomological Research is the successor of the Korean Journal of Entomology. Published by the Entomological Society of Korea (ESK) since 1970, it is the official English language journal of ESK, and publishes original research articles dealing with any aspect of entomology. Papers in any of the following fields will be considered:
-systematics-
ecology-
physiology-
biochemistry-
pest control-
embryology-
genetics-
cell and molecular biology-
medical entomology-
apiculture and sericulture.
The Journal publishes research papers and invited reviews.