通过多平衡 GFN2-xTB 量子方法实现 α-CD 对葑酮和樟脑的手性识别

IF 2.3 4区 化学 Q2 Agricultural and Biological Sciences
Cleber Paulo Andrada Anconi
{"title":"通过多平衡 GFN2-xTB 量子方法实现 α-CD 对葑酮和樟脑的手性识别","authors":"Cleber Paulo Andrada Anconi","doi":"10.1007/s10847-024-01219-3","DOIUrl":null,"url":null,"abstract":"<div><p>Binding constants for host-guest cyclodextrin systems have been estimated recently through the small-cost GFN2-xTB semiempirical quantum method in a multi-equilibrium scope. This work applied such an approach to investigate the inclusion of fenchone and camphor into α-cyclodextrin. The computational cost associated with GFN2-xTB and the supramolecular arrangements automated obtained by UD-APARM allowed the investigation of an unprecedented 18,615 starting systems (8640 for 1:1 guest/CD and 5184 + 2232 + 2559 for 1:2 guest/CD stoichiometry). According to the present study, only 18 (0.21%) for 1:1 associations and 45 (0.45%) for 1:2 associations contribute to the binding constants. The chiral recognition was achieved for the four inclusion compounds investigated: (−)-fenchone@(α-CD)<sub>2</sub>, (+)-fenchone@(α-CD)<sub>2</sub>, and (−)-camphor@(α-CD)<sub>2</sub> and (+)-camphor@(α-CD)<sub>2</sub>. When experimental and theoretical GFN2-xTB (ALPB) binding constants were compared, a linear correlation with an R<sup>2</sup> equal to 0.9933 was obtained. Estimated error varied from 1 to 3% to adjusted GFN2-xTB values. Furthermore, the theoretical data supported the experimental information that two CD units encapsulate camphor guests, increasing their stabilities. The procedure adopted can be expanded to investigate other 1:1 and 1:2 chiral host-guest systems for which it was addressed that finding out representative host-guest systems correspond to the bottleneck in the use of the discussed GFN2-xTB/UD-APARM multi-equilibrium approach.</p><h3>Graphical abstract</h3>\n<div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":638,"journal":{"name":"Journal of Inclusion Phenomena and Macrocyclic Chemistry","volume":"104 3-4","pages":"83 - 98"},"PeriodicalIF":2.3000,"publicationDate":"2024-02-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Chiral recognition of fenchone and camphor by α-CD through the multi-equilibrium GFN2-xTB quantum approach\",\"authors\":\"Cleber Paulo Andrada Anconi\",\"doi\":\"10.1007/s10847-024-01219-3\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Binding constants for host-guest cyclodextrin systems have been estimated recently through the small-cost GFN2-xTB semiempirical quantum method in a multi-equilibrium scope. This work applied such an approach to investigate the inclusion of fenchone and camphor into α-cyclodextrin. The computational cost associated with GFN2-xTB and the supramolecular arrangements automated obtained by UD-APARM allowed the investigation of an unprecedented 18,615 starting systems (8640 for 1:1 guest/CD and 5184 + 2232 + 2559 for 1:2 guest/CD stoichiometry). According to the present study, only 18 (0.21%) for 1:1 associations and 45 (0.45%) for 1:2 associations contribute to the binding constants. The chiral recognition was achieved for the four inclusion compounds investigated: (−)-fenchone@(α-CD)<sub>2</sub>, (+)-fenchone@(α-CD)<sub>2</sub>, and (−)-camphor@(α-CD)<sub>2</sub> and (+)-camphor@(α-CD)<sub>2</sub>. When experimental and theoretical GFN2-xTB (ALPB) binding constants were compared, a linear correlation with an R<sup>2</sup> equal to 0.9933 was obtained. Estimated error varied from 1 to 3% to adjusted GFN2-xTB values. Furthermore, the theoretical data supported the experimental information that two CD units encapsulate camphor guests, increasing their stabilities. The procedure adopted can be expanded to investigate other 1:1 and 1:2 chiral host-guest systems for which it was addressed that finding out representative host-guest systems correspond to the bottleneck in the use of the discussed GFN2-xTB/UD-APARM multi-equilibrium approach.</p><h3>Graphical abstract</h3>\\n<div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>\",\"PeriodicalId\":638,\"journal\":{\"name\":\"Journal of Inclusion Phenomena and Macrocyclic Chemistry\",\"volume\":\"104 3-4\",\"pages\":\"83 - 98\"},\"PeriodicalIF\":2.3000,\"publicationDate\":\"2024-02-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Inclusion Phenomena and Macrocyclic Chemistry\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://link.springer.com/article/10.1007/s10847-024-01219-3\",\"RegionNum\":4,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"Agricultural and Biological Sciences\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Inclusion Phenomena and Macrocyclic Chemistry","FirstCategoryId":"92","ListUrlMain":"https://link.springer.com/article/10.1007/s10847-024-01219-3","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 0

摘要

最近,通过小成本的 GFN2-xTB 半经验量子方法,在多平衡范围内估算出了主客体环糊精系统的结合常数。本研究采用这种方法研究了葑酮和樟脑与 α-环糊精的结合。与 GFN2-xTB 相关的计算成本以及 UD-APARM 自动获得的超分子排列,使我们得以研究前所未有的 18,615 个起始体系(1:1 来宾/CD 的起始体系为 8640 个,1:2 来宾/CD 的起始体系为 5184 + 2232 + 2559 个)。根据本研究,只有 18 个(0.21%)1:1 结合体和 45 个(0.45%)1:2 结合体对结合常数有贡献。所研究的四种包合物都实现了手性识别:(-)-葑酮@(α-CD)2、(+)-葑酮@(α-CD)2、(-)-樟脑@(α-CD)2 和 (+)- 樟脑@(α-CD)2。当比较实验和理论 GFN2-xTB(ALPB)结合常数时,得到了 R2 等于 0.9933 的线性相关。经调整的 GFN2-xTB 值的估计误差在 1% 到 3% 之间。此外,理论数据支持了实验信息,即两个 CD 单元封装了樟脑客体,增加了其稳定性。所采用的程序可扩展用于研究其他 1:1 和 1:2 手性主-客体体系,对于这些体系,找到有代表性的主-客体体系是使用所讨论的 GFN2-xTB/UD-APARM 多平衡方法的瓶颈。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Chiral recognition of fenchone and camphor by α-CD through the multi-equilibrium GFN2-xTB quantum approach

Chiral recognition of fenchone and camphor by α-CD through the multi-equilibrium GFN2-xTB quantum approach

Binding constants for host-guest cyclodextrin systems have been estimated recently through the small-cost GFN2-xTB semiempirical quantum method in a multi-equilibrium scope. This work applied such an approach to investigate the inclusion of fenchone and camphor into α-cyclodextrin. The computational cost associated with GFN2-xTB and the supramolecular arrangements automated obtained by UD-APARM allowed the investigation of an unprecedented 18,615 starting systems (8640 for 1:1 guest/CD and 5184 + 2232 + 2559 for 1:2 guest/CD stoichiometry). According to the present study, only 18 (0.21%) for 1:1 associations and 45 (0.45%) for 1:2 associations contribute to the binding constants. The chiral recognition was achieved for the four inclusion compounds investigated: (−)-fenchone@(α-CD)2, (+)-fenchone@(α-CD)2, and (−)-camphor@(α-CD)2 and (+)-camphor@(α-CD)2. When experimental and theoretical GFN2-xTB (ALPB) binding constants were compared, a linear correlation with an R2 equal to 0.9933 was obtained. Estimated error varied from 1 to 3% to adjusted GFN2-xTB values. Furthermore, the theoretical data supported the experimental information that two CD units encapsulate camphor guests, increasing their stabilities. The procedure adopted can be expanded to investigate other 1:1 and 1:2 chiral host-guest systems for which it was addressed that finding out representative host-guest systems correspond to the bottleneck in the use of the discussed GFN2-xTB/UD-APARM multi-equilibrium approach.

Graphical abstract

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
3.30
自引率
8.70%
发文量
0
审稿时长
3-8 weeks
期刊介绍: The Journal of Inclusion Phenomena and Macrocyclic Chemistry is the premier interdisciplinary publication reporting on original research into all aspects of host-guest systems. Examples of specific areas of interest are: the preparation and characterization of new hosts and new host-guest systems, especially those involving macrocyclic ligands; crystallographic, spectroscopic, thermodynamic and theoretical studies; applications in chromatography and inclusion polymerization; enzyme modelling; molecular recognition and catalysis by inclusion compounds; intercalates in biological and non-biological systems, cyclodextrin complexes and their applications in the agriculture, flavoring, food and pharmaceutical industries; synthesis, characterization and applications of zeolites. The journal publishes primarily reports of original research and preliminary communications, provided the latter represent a significant advance in the understanding of inclusion science. Critical reviews dealing with recent advances in the field are a periodic feature of the journal.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信