对球蛲虫的转录谱分析有助于深入了解支持尿路血吸虫病传播的钉螺免疫基因家族

IF 2.7 3区 农林科学 Q1 FISHERIES
Lijing Bu , Mohamed R. Habib , Lijun Lu , Martin W. Mutuku , Eric S. Loker , Si-Ming Zhang
{"title":"对球蛲虫的转录谱分析有助于深入了解支持尿路血吸虫病传播的钉螺免疫基因家族","authors":"Lijing Bu ,&nbsp;Mohamed R. Habib ,&nbsp;Lijun Lu ,&nbsp;Martin W. Mutuku ,&nbsp;Eric S. Loker ,&nbsp;Si-Ming Zhang","doi":"10.1016/j.dci.2024.105150","DOIUrl":null,"url":null,"abstract":"<div><p>Schistosomiasis, urogenital and intestinal, afflicts 251 million people worldwide with approximately two-thirds of the patients suffering from the urogenital form of the disease. Freshwater snails of the genus <em>Bulinus</em> (Gastropoda: Planorbidae) serve as obligate intermediate hosts for <em>Schistosoma haematobium</em>, the etiologic agent of human urogenital schistosomiasis. These snails also act as vectors for the transmission of schistosomiasis in livestock and wildlife. Despite their crucial role in human and veterinary medicine, our basic understanding at the molecular level of the entire <em>Bulinus</em> genus, which comprises 37 recognized species, is very limited. In this study, we employed Illumina-based RNA sequencing (RNAseq) to profile the genome-wide transcriptome of <em>Bulinus globosus</em>, one of the most important intermediate hosts for <em>S. haematobium</em> in Africa. A total of 179,221 transcripts (N50 = 1,235) were assembled and the benchmarking universal single-copy orthologs (BUSCO) was estimated to be 97.7%. The analysis revealed a substantial number of transcripts encoding evolutionarily conserved immune-related proteins, particularly C-type lectin (CLECT) domain-containing proteins (n = 316), Toll/Interleukin 1-receptor (TIR)-containing proteins (n = 75), and fibrinogen related domain-containing molecules (FReD) (n = 165). Notably, none of the FReDs are fibrinogen-related proteins (FREPs) (immunoglobulin superfamily (IgSF) + fibrinogen (FBG)). This RNAseq-based transcriptional profile provides new insights into immune capabilities of <em>Bulinus</em> snails, helps provide a framework to explain the complex patterns of compatibility between snails and schistosomes, and improves our overall understanding of comparative immunology.</p></div>","PeriodicalId":11228,"journal":{"name":"Developmental and comparative immunology","volume":null,"pages":null},"PeriodicalIF":2.7000,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Transcriptional profiling of Bulinus globosus provides insights into immune gene families in snails supporting the transmission of urogenital schistosomiasis\",\"authors\":\"Lijing Bu ,&nbsp;Mohamed R. Habib ,&nbsp;Lijun Lu ,&nbsp;Martin W. Mutuku ,&nbsp;Eric S. Loker ,&nbsp;Si-Ming Zhang\",\"doi\":\"10.1016/j.dci.2024.105150\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Schistosomiasis, urogenital and intestinal, afflicts 251 million people worldwide with approximately two-thirds of the patients suffering from the urogenital form of the disease. Freshwater snails of the genus <em>Bulinus</em> (Gastropoda: Planorbidae) serve as obligate intermediate hosts for <em>Schistosoma haematobium</em>, the etiologic agent of human urogenital schistosomiasis. These snails also act as vectors for the transmission of schistosomiasis in livestock and wildlife. Despite their crucial role in human and veterinary medicine, our basic understanding at the molecular level of the entire <em>Bulinus</em> genus, which comprises 37 recognized species, is very limited. In this study, we employed Illumina-based RNA sequencing (RNAseq) to profile the genome-wide transcriptome of <em>Bulinus globosus</em>, one of the most important intermediate hosts for <em>S. haematobium</em> in Africa. A total of 179,221 transcripts (N50 = 1,235) were assembled and the benchmarking universal single-copy orthologs (BUSCO) was estimated to be 97.7%. The analysis revealed a substantial number of transcripts encoding evolutionarily conserved immune-related proteins, particularly C-type lectin (CLECT) domain-containing proteins (n = 316), Toll/Interleukin 1-receptor (TIR)-containing proteins (n = 75), and fibrinogen related domain-containing molecules (FReD) (n = 165). Notably, none of the FReDs are fibrinogen-related proteins (FREPs) (immunoglobulin superfamily (IgSF) + fibrinogen (FBG)). This RNAseq-based transcriptional profile provides new insights into immune capabilities of <em>Bulinus</em> snails, helps provide a framework to explain the complex patterns of compatibility between snails and schistosomes, and improves our overall understanding of comparative immunology.</p></div>\",\"PeriodicalId\":11228,\"journal\":{\"name\":\"Developmental and comparative immunology\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2024-02-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Developmental and comparative immunology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0145305X24000223\",\"RegionNum\":3,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"FISHERIES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Developmental and comparative immunology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0145305X24000223","RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"FISHERIES","Score":null,"Total":0}
引用次数: 0

摘要

全世界有 2.51 亿人患有血吸虫病,包括泌尿系统和肠道血吸虫病,其中约三分之二的患者患有泌尿系统血吸虫病。淡水螺属 Bulinus(腹足纲:Planorbidae)是人类尿路血吸虫病病原体血吸虫的必经中间宿主。这些钉螺也是血吸虫病在牲畜和野生动物中传播的媒介。尽管它们在人类和兽医领域发挥着重要作用,但我们对整个 Bulinus 属(包括 37 个已知物种)分子水平的基本了解却非常有限。在这项研究中,我们采用了基于 Illumina 的 RNA 测序(RNAseq)技术,对非洲血吸虫最重要的中间宿主之一 Bulinus globosus 的全基因组转录组进行了分析。共组装了 179 221 个转录本(N50 = 1 235),通用单拷贝直向同源物(BUSCO)的基准估计为 97.7%。分析发现了大量编码进化保守的免疫相关蛋白的转录本,尤其是含 C 型凝集素(CLECT)结构域的蛋白(n = 316)、含 Toll/白细胞介素 1 受体(TIR)的蛋白(n = 75)和含纤维蛋白原相关结构域的分子(FReD)(n = 165)。值得注意的是,这些 FReD 都不是纤维蛋白原相关蛋白(FREPs)(免疫球蛋白超家族 (IgSF) + 纤维蛋白原 (FBG))。这一基于 RNAseq 的转录图谱为了解 Bulinus 钉螺的免疫能力提供了新的视角,有助于为解释钉螺与血吸虫之间复杂的相容性模式提供一个框架,并提高我们对比较免疫学的整体认识。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Transcriptional profiling of Bulinus globosus provides insights into immune gene families in snails supporting the transmission of urogenital schistosomiasis

Schistosomiasis, urogenital and intestinal, afflicts 251 million people worldwide with approximately two-thirds of the patients suffering from the urogenital form of the disease. Freshwater snails of the genus Bulinus (Gastropoda: Planorbidae) serve as obligate intermediate hosts for Schistosoma haematobium, the etiologic agent of human urogenital schistosomiasis. These snails also act as vectors for the transmission of schistosomiasis in livestock and wildlife. Despite their crucial role in human and veterinary medicine, our basic understanding at the molecular level of the entire Bulinus genus, which comprises 37 recognized species, is very limited. In this study, we employed Illumina-based RNA sequencing (RNAseq) to profile the genome-wide transcriptome of Bulinus globosus, one of the most important intermediate hosts for S. haematobium in Africa. A total of 179,221 transcripts (N50 = 1,235) were assembled and the benchmarking universal single-copy orthologs (BUSCO) was estimated to be 97.7%. The analysis revealed a substantial number of transcripts encoding evolutionarily conserved immune-related proteins, particularly C-type lectin (CLECT) domain-containing proteins (n = 316), Toll/Interleukin 1-receptor (TIR)-containing proteins (n = 75), and fibrinogen related domain-containing molecules (FReD) (n = 165). Notably, none of the FReDs are fibrinogen-related proteins (FREPs) (immunoglobulin superfamily (IgSF) + fibrinogen (FBG)). This RNAseq-based transcriptional profile provides new insights into immune capabilities of Bulinus snails, helps provide a framework to explain the complex patterns of compatibility between snails and schistosomes, and improves our overall understanding of comparative immunology.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
6.20
自引率
6.90%
发文量
206
审稿时长
49 days
期刊介绍: Developmental and Comparative Immunology (DCI) is an international journal that publishes articles describing original research in all areas of immunology, including comparative aspects of immunity and the evolution and development of the immune system. Manuscripts describing studies of immune systems in both vertebrates and invertebrates are welcome. All levels of immunological investigations are appropriate: organismal, cellular, biochemical and molecular genetics, extending to such fields as aging of the immune system, interaction between the immune and neuroendocrine system and intestinal immunity.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信