使用潜在高斯过程的贝叶斯生存树状危害模型。

IF 1.4 4区 数学 Q3 BIOLOGY
Biometrics Pub Date : 2024-01-29 DOI:10.1093/biomtc/ujad009
Richard D Payne, Nilabja Guha, Bani K Mallick
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引用次数: 0

摘要

生存模型用于分析各种学科中的时间到事件数据。比例危险模型提供可解释的参数估计,但比例危险假设并不总是合适的。非参数模型更为灵活,但往往缺乏明确的推论框架。我们提出的贝叶斯树状危害分区模型既灵活又有推论性。推论通过后验树结构获得,并通过使用潜在高斯过程对每个分区中的对数危害函数建模来保持灵活性。通过拉普拉斯近似法对每个分区元素中的参数进行边际化,从而实现高效的可逆跃迁马尔科夫链蒙特卡罗算法。建立了估计器的一致性特性。该方法可用于帮助确定亚组以及时间到事件数据中的预后和/或预测性生物标记物。该方法在模拟数据和肝硬化数据集上与一些现有方法进行了比较。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A Bayesian survival treed hazards model using latent Gaussian processes.

Survival models are used to analyze time-to-event data in a variety of disciplines. Proportional hazard models provide interpretable parameter estimates, but proportional hazard assumptions are not always appropriate. Non-parametric models are more flexible but often lack a clear inferential framework. We propose a Bayesian treed hazards partition model that is both flexible and inferential. Inference is obtained through the posterior tree structure and flexibility is preserved by modeling the log-hazard function in each partition using a latent Gaussian process. An efficient reversible jump Markov chain Monte Carlo algorithm is accomplished by marginalizing the parameters in each partition element via a Laplace approximation. Consistency properties for the estimator are established. The method can be used to help determine subgroups as well as prognostic and/or predictive biomarkers in time-to-event data. The method is compared with some existing methods on simulated data and a liver cirrhosis dataset.

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来源期刊
Biometrics
Biometrics 生物-生物学
CiteScore
2.70
自引率
5.30%
发文量
178
审稿时长
4-8 weeks
期刊介绍: The International Biometric Society is an international society promoting the development and application of statistical and mathematical theory and methods in the biosciences, including agriculture, biomedical science and public health, ecology, environmental sciences, forestry, and allied disciplines. The Society welcomes as members statisticians, mathematicians, biological scientists, and others devoted to interdisciplinary efforts in advancing the collection and interpretation of information in the biosciences. The Society sponsors the biennial International Biometric Conference, held in sites throughout the world; through its National Groups and Regions, it also Society sponsors regional and local meetings.
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