叶甲虫 Monolepta hieroglyphica 中的香叶基二磷酸合成酶的功能特征。

IF 1.5 4区 农林科学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Xuan Song, Chang Liu, Khalid H. Dhiloo, Chao-qun Yi, Tian-tao Zhang, Yong-jun Zhang
{"title":"叶甲虫 Monolepta hieroglyphica 中的香叶基二磷酸合成酶的功能特征。","authors":"Xuan Song,&nbsp;Chang Liu,&nbsp;Khalid H. Dhiloo,&nbsp;Chao-qun Yi,&nbsp;Tian-tao Zhang,&nbsp;Yong-jun Zhang","doi":"10.1002/arch.22088","DOIUrl":null,"url":null,"abstract":"<p>Geranylgeranyl diphosphate synthase (GGPPS) as the short-chain prenyltransferases for catalyzing the formation of the acyclic precursor (<i>E</i>)-GGPP has been extensively investigated in mammals, plants, and microbes, but its functional plasticity is poorly understood in insect species. Here, a single GGPPS in leaf beetle <i>Monolepta hieroglyphica</i>, MhieGGPPS, was functionally investigated. Phylogenetic analysis showed that MhieGGPPS was clustered in one clade with homologs and had six conserved motifs. Molecular docking results indicated that binding sites of dimethylallyl diphosphate (DMAPP), (<i>E</i>)-geranyl pyrophosphate (GPP), and (<i>E</i>)-farnesyl pyrophosphate (FPP) were in the chain-length determination region of MhieGGPPS, respectively. In vitro, recombiant MhieGGPPS could catalyze the formation of (<i>E</i>)-geranylgeraniol against different combinations of substrates including isopentenyl pyrophosphate (IPP)/DMAPP, IPP/(<i>E</i>)-GPP, and IPP/(<i>E</i>)-FPP, suggesting that MhieGGPPS could not only use (<i>E</i>)-FPP but also (<i>E</i>)-GPP and DMAPP as the allylic cosubstrates. In kinetic analysis, the (<i>E</i>)-FPP was most tightly bound to MhieGGPPS than that of others. It was proposed that MhieGGPPS as a multifunctional enzyme is differentiated from the other GGPPSs in the animals and plants, which only accepted (<i>E</i>)-FPP as the allylic cosubstrate. These findings provide valuable insights into understanding the functional plasticity of GGPPS in <i>M. hieroglyphica</i> and the novel biosynthesis mechanism in the isoprenoid pathway.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 2","pages":""},"PeriodicalIF":1.5000,"publicationDate":"2024-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Functional characterization of a geranylgeranyl diphosphate synthase in the leaf beetle Monolepta hieroglyphica\",\"authors\":\"Xuan Song,&nbsp;Chang Liu,&nbsp;Khalid H. Dhiloo,&nbsp;Chao-qun Yi,&nbsp;Tian-tao Zhang,&nbsp;Yong-jun Zhang\",\"doi\":\"10.1002/arch.22088\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Geranylgeranyl diphosphate synthase (GGPPS) as the short-chain prenyltransferases for catalyzing the formation of the acyclic precursor (<i>E</i>)-GGPP has been extensively investigated in mammals, plants, and microbes, but its functional plasticity is poorly understood in insect species. Here, a single GGPPS in leaf beetle <i>Monolepta hieroglyphica</i>, MhieGGPPS, was functionally investigated. Phylogenetic analysis showed that MhieGGPPS was clustered in one clade with homologs and had six conserved motifs. Molecular docking results indicated that binding sites of dimethylallyl diphosphate (DMAPP), (<i>E</i>)-geranyl pyrophosphate (GPP), and (<i>E</i>)-farnesyl pyrophosphate (FPP) were in the chain-length determination region of MhieGGPPS, respectively. In vitro, recombiant MhieGGPPS could catalyze the formation of (<i>E</i>)-geranylgeraniol against different combinations of substrates including isopentenyl pyrophosphate (IPP)/DMAPP, IPP/(<i>E</i>)-GPP, and IPP/(<i>E</i>)-FPP, suggesting that MhieGGPPS could not only use (<i>E</i>)-FPP but also (<i>E</i>)-GPP and DMAPP as the allylic cosubstrates. In kinetic analysis, the (<i>E</i>)-FPP was most tightly bound to MhieGGPPS than that of others. It was proposed that MhieGGPPS as a multifunctional enzyme is differentiated from the other GGPPSs in the animals and plants, which only accepted (<i>E</i>)-FPP as the allylic cosubstrate. These findings provide valuable insights into understanding the functional plasticity of GGPPS in <i>M. hieroglyphica</i> and the novel biosynthesis mechanism in the isoprenoid pathway.</p>\",\"PeriodicalId\":8281,\"journal\":{\"name\":\"Archives of Insect Biochemistry and Physiology\",\"volume\":\"115 2\",\"pages\":\"\"},\"PeriodicalIF\":1.5000,\"publicationDate\":\"2024-02-13\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Archives of Insect Biochemistry and Physiology\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/arch.22088\",\"RegionNum\":4,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Archives of Insect Biochemistry and Physiology","FirstCategoryId":"97","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/arch.22088","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

香叶基二磷酸合酶(GGPPS)作为催化形成无环前体(E)-GGPP 的短链前体转移酶,已经在哺乳动物、植物和微生物中得到了广泛的研究,但对其在昆虫物种中的功能可塑性了解甚少。本文对叶甲虫 Monolepta hieroglyphica 的单一 GGPPS MhieGGPPS 进行了功能研究。系统进化分析表明,MhieGGPPS 与同源物聚集在一个支系中,并有六个保守的基序。分子对接结果表明,二甲基烯丙基二磷酸(DMAPP)、(E)-丙二酰焦磷酸(GPP)和(E)-法呢酰焦磷酸(FPP)的结合位点分别位于 MhieGGPPS 的链长决定区。在体外,重组的 MhieGGPPS 可催化焦磷酸异戊烯酯(IPP)/DMAPP、IPP/(E)-GPP 和 IPP/(E)-FPP 等不同底物组合生成(E)-geranylgeraniol,这表明 MhieGGPPS 不仅可以使用(E)-FPP,还可以使用(E)-GPP 和 DMAPP 作为烯丙基共底物。在动力学分析中,(E)-FPP 与 MhieGGPPS 的结合最紧密。研究认为,MhieGGPPS 是一种多功能酶,有别于动物和植物中其他只接受 (E)-FPP 作为烯丙基共底物的 GGPPS。这些发现为了解 hieroglyphica 中 GGPPS 的功能可塑性以及异戊二烯途径中的新型生物合成机制提供了宝贵的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Functional characterization of a geranylgeranyl diphosphate synthase in the leaf beetle Monolepta hieroglyphica

Functional characterization of a geranylgeranyl diphosphate synthase in the leaf beetle Monolepta hieroglyphica

Geranylgeranyl diphosphate synthase (GGPPS) as the short-chain prenyltransferases for catalyzing the formation of the acyclic precursor (E)-GGPP has been extensively investigated in mammals, plants, and microbes, but its functional plasticity is poorly understood in insect species. Here, a single GGPPS in leaf beetle Monolepta hieroglyphica, MhieGGPPS, was functionally investigated. Phylogenetic analysis showed that MhieGGPPS was clustered in one clade with homologs and had six conserved motifs. Molecular docking results indicated that binding sites of dimethylallyl diphosphate (DMAPP), (E)-geranyl pyrophosphate (GPP), and (E)-farnesyl pyrophosphate (FPP) were in the chain-length determination region of MhieGGPPS, respectively. In vitro, recombiant MhieGGPPS could catalyze the formation of (E)-geranylgeraniol against different combinations of substrates including isopentenyl pyrophosphate (IPP)/DMAPP, IPP/(E)-GPP, and IPP/(E)-FPP, suggesting that MhieGGPPS could not only use (E)-FPP but also (E)-GPP and DMAPP as the allylic cosubstrates. In kinetic analysis, the (E)-FPP was most tightly bound to MhieGGPPS than that of others. It was proposed that MhieGGPPS as a multifunctional enzyme is differentiated from the other GGPPSs in the animals and plants, which only accepted (E)-FPP as the allylic cosubstrate. These findings provide valuable insights into understanding the functional plasticity of GGPPS in M. hieroglyphica and the novel biosynthesis mechanism in the isoprenoid pathway.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
4.30
自引率
4.50%
发文量
115
审稿时长
12 months
期刊介绍: Archives of Insect Biochemistry and Physiology is an international journal that publishes articles in English that are of interest to insect biochemists and physiologists. Generally these articles will be in, or related to, one of the following subject areas: Behavior, Bioinformatics, Carbohydrates, Cell Line Development, Cell Signalling, Development, Drug Discovery, Endocrinology, Enzymes, Lipids, Molecular Biology, Neurobiology, Nucleic Acids, Nutrition, Peptides, Pharmacology, Pollinators, Proteins, Toxicology. Archives will publish only original articles. Articles that are confirmatory in nature or deal with analytical methods previously described will not be accepted.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信