从海洋环境中分离出来的 Flavivirga spongiicola sp.

IF 3.3 4区 生物学 Q2 MICROBIOLOGY
Journal of Microbiology Pub Date : 2024-01-01 Epub Date: 2024-02-06 DOI:10.1007/s12275-023-00102-z
Sung-Hyun Yang, Mi-Jeong Park, Hyun-Myung Oh, Yeong-Jun Park, Kae Kyoung Kwon
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引用次数: 0

摘要

分别从韩国江陵市的海洋海绵伪尾柱虫和东海郁陵盆地的深海沉积物中分离出两株新型革兰氏染色阴性、严格需氧、棒状(1.2 ± 3.4 μm × 0.3 ± 0.7 μm)、不运动的海洋细菌,命名为 MEBiC05379T 和 MEBiC07777T。16S rRNA 基因序列分析表明,这些菌株与 Flavivirga 属的成员高度相似(序列相同度为 97.0%-98.4%)。两株新菌株均为嗜中性、嗜中性 pH 值和轻微嗜卤。与其他 Flavivirga 成员相似,两株菌株的主要细胞脂肪酸均为异-C15:0、异-C15:1 G、异-C15:03-OH 和异-C17:0 3-OH,其中 MEBiC05379T 和 MEBiC07777T 含有相对较高比例的 C12:0 和总特征 3(C16:1ω7c 和/或 C16:1ω6c)。在这两个类群中,主要的类异戊二烯醌是 MK-6。MEBiC05379T 和 MEBiC07777T 基因组的 DNA G + C 含量分别为 32.62 摩尔%和 32.46 摩尔%。与黄腐菌属其他成员相比,两株菌株的 DNA G + C 比率和脂肪酸模式相似,但酶表达和碳源利用模式不同。Flavivirga属的基因组对褐藻糖胶和硫酸化半乳聚糖表现出酶的偏好。考虑到单系规则,Flavivirga 属与相邻属的 AAI 值为 76.0-78.7%。根据表型、基因组和生化数据,MEBiC05379T 和 MEBiC07777T 菌株代表了 Flavivirga 属中的两个新物种,其名称为 Flavivirga spongiicola sp.nov.(MEBiC05379T [= KCTC 92527 T = JCM 16662 T])和 Flavivirga abyssicola sp.
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Flavivirga spongiicola sp. nov. and Flavivirga abyssicola sp. nov., Isolated from Marine Environments.

Flavivirga spongiicola sp. nov. and Flavivirga abyssicola sp. nov., Isolated from Marine Environments.

Two novel Gram-stain-negative, strictly-aerobic, rod-shaped (1.2 ± 3.4 μm × 0.3 ± 0.7 μm), and non-motile marine bacterial species, designated MEBiC05379T and MEBiC07777T, were isolated from a marine sponge Pseudaxinella sp. in Gangneung City and deep-sea sediments of the Ulleung basin in the East Sea of Korea, respectively. The 16S rRNA gene sequence analysis revealed high levels of similarities between these strains and members of the genus Flavivirga (97.0-98.4% sequence identities). Both novel strains revealed as mesophilic, neutrophilic in pH and slightly halophilic. Similar to those of other Flavivirga members, the primary cellular fatty acids of both strains were iso-C15:0, iso-C15:1 G, iso-C15:03-OH, and iso-C17:0 3-OH, with MEBiC05379T and MEBiC07777T containing relatively higher proportions of C12:0 and summed feature 3 (C16:1ω7c and/or C16:1ω6c). In both taxa, the major isoprenoid quinone was MK-6. The DNA G + C contents of MEBiC05379T and MEBiC07777T genomes were 32.62 and 32.46 mol%, respectively. Compared to other members of Flavivirga, both strains exhibited similar DNA G + C ratio and fatty acids pattern, yet enzyme expression and carbon sources utilization pattern were different. Genomes of the genus Flavivirga showed enzyme preferences to fucoidan and sulfated galactans. Considering the monophyly rule, AAI values delineate the genus Flavivirga from adjacent genera calculated to be 76.0-78.7%. Based on the phenotypic, genomic and biochemical data, strains for MEBiC05379T and MEBiC07777T thus represent two novel species in the genus Flavivirga, for which the names Flavivirga spongiicola sp. nov. (MEBiC05379T [= KCTC 92527 T = JCM 16662 T]), and Flavivirga abyssicola sp. nov. (MEBiC07777T [= KCTC 92563 T = JCM 36477 T]) are proposed.

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来源期刊
Journal of Microbiology
Journal of Microbiology 生物-微生物学
CiteScore
5.70
自引率
3.30%
发文量
0
审稿时长
3 months
期刊介绍: Publishes papers that deal with research on microorganisms, including archaea, bacteria, yeasts, fungi, microalgae, protozoa, and simple eukaryotic microorganisms. Topics considered for publication include Microbial Systematics, Evolutionary Microbiology, Microbial Ecology, Environmental Microbiology, Microbial Genetics, Genomics, Molecular Biology, Microbial Physiology, Biochemistry, Microbial Pathogenesis, Host-Microbe Interaction, Systems Microbiology, Synthetic Microbiology, Bioinformatics and Virology. Manuscripts dealing with simple identification of microorganism(s), cloning of a known gene and its expression in a microbial host, and clinical statistics will not be considered for publication by JM.
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