果蝇隐色素的相互作用

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Photochemistry and Photobiology Pub Date : 2024-09-01 Epub Date: 2024-02-05 DOI:10.1111/php.13916
Gozde Ozcelik, Mehmet Serdar Koca, Buket Sunbul, Fatma Yilmaz-Atay, Feride Demirhan, Busra Tiryaki, Kevser Cilenk, Saba Selvi, Nuri Ozturk
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引用次数: 0

摘要

在这项研究中,我们研究了果蝇昼夜节律钟背后错综复杂的调控机制,重点是光诱导隐色团(DmCry)的构象变化。在光照下,DmCry发生构象变化,促使其与Timeless蛋白和Jetlag蛋白结合,启动了一个对新昼夜节律周期的开始至关重要的级联过程。DmCry 随后被降解,导致重设机制脱敏。DmCry 蛋白-蛋白相互作用(PPIs)的瞬时性和短暂性导致 DmCry 在光照射后一小时内降解,这给全面探索带来了挑战。为了解决这个问题,我们采用了近距离依赖性生物素化技术,将工程化的 BioID(TurboID)和 APEX(APEX2)酶与质谱技术相结合。这种方法鉴定了果蝇 S2 细胞中 DmCry 的体外相互作用组,发现了几个与 DmCry 相关的新型 PPI。通过一种新型共沉淀免疫技术对这些相互作用进行了验证,从而提高了我们研究结果的可靠性。重要的是,我们的研究表明这种方法有可能揭示更多涉及 DmCry 的昼夜节律钟或磁场依赖性 PPI。对DmCry相互作用组的探索不仅加深了我们对昼夜节律调控的理解,还为今后研究果蝇中依赖于光和时间的蛋白质相互作用建立了一个多功能框架。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Interactions of drosophila cryptochrome.

In this study, we investigate the intricate regulatory mechanisms underlying the circadian clock in Drosophila, focusing on the light-induced conformational changes in the cryptochrome (DmCry). Upon light exposure, DmCry undergoes conformational changes that prompt its binding to Timeless and Jetlag proteins, initiating a cascade crucial for the starting of a new circadian cycle. DmCry is subsequently degraded, contributing to the desensitization of the resetting mechanism. The transient and short-lived nature of DmCry protein-protein interactions (PPIs), leading to DmCry degradation within an hour of light exposure, presents a challenge for comprehensive exploration. To address this, we employed proximity-dependent biotinylation techniques, combining engineered BioID (TurboID) and APEX (APEX2) enzymes with mass spectrometry. This approach enabled the identification of the in vitro DmCry interactome in Drosophila S2 cells, uncovering several novel PPIs associated with DmCry. Validation of these interactions through a novel co-immunoprecipitation technique enhances the reliability of our findings. Importantly, our study suggests the potential of this method to reveal additional circadian clock- or magnetic field-dependent PPIs involving DmCry. This exploration of the DmCry interactome not only advances our understanding of circadian clock regulation but also establishes a versatile framework for future investigations into light- and time-dependent protein interactions in Drosophila.

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来源期刊
Photochemistry and Photobiology
Photochemistry and Photobiology 生物-生化与分子生物学
CiteScore
6.70
自引率
12.10%
发文量
171
审稿时长
2.7 months
期刊介绍: Photochemistry and Photobiology publishes original research articles and reviews on current topics in photoscience. Topics span from the primary interaction of light with molecules, cells, and tissue to the subsequent biological responses, representing disciplinary and interdisciplinary research in the fields of chemistry, physics, biology, and medicine. Photochemistry and Photobiology is the official journal of the American Society for Photobiology.
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