玫瑰果酱中微生物群落的多样性和预测功能分析

IF 1.9 4区 农林科学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Ling-Xiao Liu, Ao-Nan Xia, Xiao-Juan Tang, Yan-Zhen Zhang, Xian-Shui Meng, Sheng-Ming Lei, Bin Wang, Shan-Li Peng, Yun-Guo Liu
{"title":"玫瑰果酱中微生物群落的多样性和预测功能分析","authors":"Ling-Xiao Liu,&nbsp;Ao-Nan Xia,&nbsp;Xiao-Juan Tang,&nbsp;Yan-Zhen Zhang,&nbsp;Xian-Shui Meng,&nbsp;Sheng-Ming Lei,&nbsp;Bin Wang,&nbsp;Shan-Li Peng,&nbsp;Yun-Guo Liu","doi":"10.1111/jfs.13102","DOIUrl":null,"url":null,"abstract":"<p>The microbial diversity of rose jam was analyzed by high-throughput sequencing, along with functional prediction of the bacterial community. The results indicate that <i>Pseudomonas</i>, <i>Pantoea</i>, and <i>Burkholderia</i> emerged were the top three dominant bacterial groups. Proteobacteria was particularly abundant in R4 (99.1%) and R6 (96.12%). <i>Zygosaccharomyces</i>, unclassified fungi, and <i>Botrytis</i> constituted the top three fungal groups. The presence of unclassified OTUs was observed in all samples, particularly in R6 (52.36%), R8 (45.28), and R9 samples (39.57%). Gene prediction using PICRUSt revealed the existence of multiple KEGG functional modules associated with human metabolism in each rose jam sample. The presence of a high abundance of functional genes indicated the microbial community's diverse wide range of microgenetic resources that can be further explored for research purposes. The microbial community found in rose jam exhibits remarkable diversity and encompasses valuable functional information relevant to human health.</p>","PeriodicalId":15814,"journal":{"name":"Journal of Food Safety","volume":"44 1","pages":""},"PeriodicalIF":1.9000,"publicationDate":"2024-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Microbial diversity and prediction function profiling of microbial communities in rose jam\",\"authors\":\"Ling-Xiao Liu,&nbsp;Ao-Nan Xia,&nbsp;Xiao-Juan Tang,&nbsp;Yan-Zhen Zhang,&nbsp;Xian-Shui Meng,&nbsp;Sheng-Ming Lei,&nbsp;Bin Wang,&nbsp;Shan-Li Peng,&nbsp;Yun-Guo Liu\",\"doi\":\"10.1111/jfs.13102\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>The microbial diversity of rose jam was analyzed by high-throughput sequencing, along with functional prediction of the bacterial community. The results indicate that <i>Pseudomonas</i>, <i>Pantoea</i>, and <i>Burkholderia</i> emerged were the top three dominant bacterial groups. Proteobacteria was particularly abundant in R4 (99.1%) and R6 (96.12%). <i>Zygosaccharomyces</i>, unclassified fungi, and <i>Botrytis</i> constituted the top three fungal groups. The presence of unclassified OTUs was observed in all samples, particularly in R6 (52.36%), R8 (45.28), and R9 samples (39.57%). Gene prediction using PICRUSt revealed the existence of multiple KEGG functional modules associated with human metabolism in each rose jam sample. The presence of a high abundance of functional genes indicated the microbial community's diverse wide range of microgenetic resources that can be further explored for research purposes. The microbial community found in rose jam exhibits remarkable diversity and encompasses valuable functional information relevant to human health.</p>\",\"PeriodicalId\":15814,\"journal\":{\"name\":\"Journal of Food Safety\",\"volume\":\"44 1\",\"pages\":\"\"},\"PeriodicalIF\":1.9000,\"publicationDate\":\"2024-01-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Food Safety\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/jfs.13102\",\"RegionNum\":4,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Food Safety","FirstCategoryId":"97","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/jfs.13102","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

通过高通量测序分析了玫瑰酱的微生物多样性,并对细菌群落进行了功能预测。结果表明,假单胞菌、泛氏菌和伯克霍尔德氏菌是最主要的三大细菌群。蛋白质细菌在 R4(99.1%)和 R6(96.12%)中特别多。酿酒酵母菌、未分类真菌和灰霉病菌构成了前三大真菌群。所有样本中都出现了未分类的 OTU,尤其是在 R6(52.36%)、R8(45.28%)和 R9(39.57%)样本中。使用 PICRUSt 进行的基因预测显示,在每个玫瑰果酱样本中都存在多个与人类新陈代谢相关的 KEGG 功能模块。高丰度功能基因的存在表明,微生物群落的微基因资源丰富多样,可进一步用于研究目的。玫瑰果酱中发现的微生物群落具有显著的多样性,包含与人类健康相关的宝贵功能信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Microbial diversity and prediction function profiling of microbial communities in rose jam

Microbial diversity and prediction function profiling of microbial communities in rose jam

The microbial diversity of rose jam was analyzed by high-throughput sequencing, along with functional prediction of the bacterial community. The results indicate that Pseudomonas, Pantoea, and Burkholderia emerged were the top three dominant bacterial groups. Proteobacteria was particularly abundant in R4 (99.1%) and R6 (96.12%). Zygosaccharomyces, unclassified fungi, and Botrytis constituted the top three fungal groups. The presence of unclassified OTUs was observed in all samples, particularly in R6 (52.36%), R8 (45.28), and R9 samples (39.57%). Gene prediction using PICRUSt revealed the existence of multiple KEGG functional modules associated with human metabolism in each rose jam sample. The presence of a high abundance of functional genes indicated the microbial community's diverse wide range of microgenetic resources that can be further explored for research purposes. The microbial community found in rose jam exhibits remarkable diversity and encompasses valuable functional information relevant to human health.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Journal of Food Safety
Journal of Food Safety 工程技术-生物工程与应用微生物
CiteScore
5.30
自引率
0.00%
发文量
69
审稿时长
1 months
期刊介绍: The Journal of Food Safety emphasizes mechanistic studies involving inhibition, injury, and metabolism of food poisoning microorganisms, as well as the regulation of growth and toxin production in both model systems and complex food substrates. It also focuses on pathogens which cause food-borne illness, helping readers understand the factors affecting the initial detection of parasites, their development, transmission, and methods of control and destruction.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信