Rasheed Omobolaji Alabi, Alhadi Almangush, Mohammed Elmusrati, Ilmo Leivo, Antti A Mäkitie
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引用次数: 0
摘要
背景:在过去几十年中,喉鳞状细胞癌(LSCC)的死亡率并没有明显下降:我们的主要目的是比较 DeepTables 与最先进的机器学习(ML)算法(Voting ensemble、Stack ensemble 和 XGBoost)的预测性能,以对 LSCC 患者的总生存(OS)几率进行分层。此外,我们还利用全局和局部模型诊断技术提供了可解释性,从而对所开发的模型进行了补充:方法:我们对监测、流行病学和最终结果(SEER)数据库中确诊为 LSCC 的 2792 例患者进行了审查。使用SHAPLE Additive exPlanations(SHAP)技术检查了全局模型诊断的可解释性。同样,使用局部可解释模型不可知论解释(LIME)对预测进行了个别解释:结果:最先进的 ML 集合算法的性能优于 DeepTables。具体来说,所考察的集合算法显示出可比的加权接收曲线下面积分别为 76.9、76.8 和 76.1,准确率分别为 71.2%、70.2% 和 71.8%。全局可解释性方法(SHAP)表明,患者诊断时的年龄、N分期、T分期、肿瘤分级和婚姻状况是其中最重要的参数:预测 OS 的 ML 模型可作为 LSCC 患者治疗计划的辅助工具。
Interpretable machine learning model for prediction of overall survival in laryngeal cancer.
Background: The mortality rates of laryngeal squamous cell carcinoma cancer (LSCC) have not significantly decreased in the last decades.Objectives: We primarily aimed to compare the predictive performance of DeepTables with the state-of-the-art machine learning (ML) algorithms (Voting ensemble, Stack ensemble, and XGBoost) to stratify patients with LSCC into chance of overall survival (OS). In addition, we complemented the developed model by providing interpretability using both global and local model-agnostic techniques.Methods: A total of 2792 patients in the Surveillance, Epidemiology, and End Results (SEER) database diagnosed with LSCC were reviewed. The global model-agnostic interpretability was examined using SHapley Additive exPlanations (SHAP) technique. Likewise, individual interpretation of the prediction was made using Local Interpretable Model Agnostic Explanations (LIME).Results: The state-of-the-art ML ensemble algorithms outperformed DeepTables. Specifically, the examined ensemble algorithms showed comparable weighted area under receiving curve of 76.9, 76.8, and 76.1 with an accuracy of 71.2%, 70.2%, and 71.8%, respectively. The global methods of interpretability (SHAP) demonstrated that the age of the patient at diagnosis, N-stage, T-stage, tumor grade, and marital status are among the prominent parameters.Conclusions: A ML model for OS prediction may serve as an ancillary tool for treatment planning of LSCC patients.
期刊介绍:
Acta Oto-Laryngologica is a truly international journal for translational otolaryngology and head- and neck surgery. The journal presents cutting-edge papers on clinical practice, clinical research and basic sciences. Acta also bridges the gap between clinical and basic research.