模拟西尼罗河病毒在鸟类和人类中的传播:使用细胞自动机方法的优势

IF 8.8 3区 医学 Q1 Medicine
Baki Cissé , David R. Lapen , K. Chalvet-Monfray , Nicholas H. Ogden , Antoinette Ludwig
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引用次数: 0

摘要

在加拿大,西尼罗河病毒(WNV)的周期性循环难以预测,除了气候因素外,似乎还与来自美国南部的受感染鸟类的迁徙有关。这一假说尚未在空间分布模型中得到探讨。这项工作的主要目的是为加拿大的 WNV 传播建立一个空间明确的动态模型,使我们能够探索与 WNV 传播无关的假设。在加拿大安大略省东部的一个测试区域,我们使用了一种针对多宿主(鸟类和人类)的细胞自动机(CA)方法。该工具旨在探索宿主和病媒空间异质性、宿主迁移和病媒摄食偏好的作用。我们开发了一个空间化的分区 SEIRDS-SEI 模型,用于 WNV 传播,研究区域划分为 4 平方公里的矩形单元。我们使用了来自 eBird 项目的 2010-2021 年鸟类数据和安大略省公共卫生部门收集的 2010-2019 年蚊虫数据,以模拟鸟类和蚊虫的季节性变化。我们考虑了异质的鸟类密度(高适宜性区域和低适宜性区域)以及同质的蚊子和人类密度。在鸟类高适宜性地区,我们确定了 5 个 WNV 感染鸟类的进入点。我们将模拟结果与现场采集的 WNV 感染蚊子库进行了比较。模拟和敏感性分析是使用 MATLAB 软件进行的。结果显示,模拟和观察到的疫情之间有很好的对应关系,证明了我们的模型假设和校准的有效性。敏感性分析表明,除了蚊子叮咬鸟类率(c(B,M))和蚊子自然死亡率(dM)外,模型中每个参数增加或减少 5%,对病例总数(新感染鸟类和人类)、流行高峰或发生日期的影响都非常有限。我们证明了 CA 方法在研究 WNV 在多宿主异质景观中传播的实用性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Modeling West Nile Virus transmission in birds and humans: Advantages of using a cellular automata approach

In Canada, the periodic circulation of West Nile Virus (WNV) is difficult to predict and, beyond climatic factors, appears to be related to the migratory movements of infected birds from the southern United States. This hypothesis has not yet been explored in a spatially distributed model. The main objective of this work was to develop a spatially explicit dynamic model for the transmission of WNV in Canada, that allows us to explore non-climate related hypotheses associated with WNV transmission. A Cellular Automata (CA) approach for multiple hosts (birds and humans) is used for a test region in eastern Ontario, Canada. The tool is designed to explore the role of host and vector spatial heterogeneity, host migration, and vector feeding preferences.

We developed a spatialized compartmental SEIRDS-SEI model for WNV transmission with a study region divided into 4 km2 rectangular cells. We used 2010–2021 bird data from the eBird project and 2010–2019 mosquito data collected by Ontario Public Health to mimic bird and mosquito seasonal variation. We considered heterogeneous bird densities (high and low suitability areas) and homogeneous mosquito and human densities. In high suitability areas for birds, we identified 5 entry points for WNV-infected birds. We compared our simulations with pools of WNV-infected field collected mosquitoes. Simulations and sensitivity analyses were performed using MATLAB software.

The results showed good correspondence between simulated and observed epidemics, supporting the validity of our model assumptions and calibration. Sensitivity analysis showed that a 5% increase or decrease in each parameter of our model except for the biting rate of bird by mosquito (c(B,M)) and mosquito natural mortality rate (dM), had a very limited effect on the total number of cases (newly infected birds and humans), prevalence peak, or date of occurrence. We demonstrate the utility of the CA approach for studying WNV transmission in a heterogeneous landscape with multiple hosts.

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来源期刊
Infectious Disease Modelling
Infectious Disease Modelling Mathematics-Applied Mathematics
CiteScore
17.00
自引率
3.40%
发文量
73
审稿时长
17 weeks
期刊介绍: Infectious Disease Modelling is an open access journal that undergoes peer-review. Its main objective is to facilitate research that combines mathematical modelling, retrieval and analysis of infection disease data, and public health decision support. The journal actively encourages original research that improves this interface, as well as review articles that highlight innovative methodologies relevant to data collection, informatics, and policy making in the field of public health.
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