{"title":"MODMS:促进紫花苜蓿(Medicago sativa L.)生物学研究的多组学数据库。","authors":"Longfa Fang, Tao Liu, Mingyu Li, XueMing Dong, Yuling Han, Congzhuo Xu, Siqi Li, Jia Zhang, Xiaojuan He, Qiang Zhou, Dong Luo, Zhipeng Liu","doi":"10.1093/hr/uhad245","DOIUrl":null,"url":null,"abstract":"<p><p>Alfalfa (<i>Medicago sativa</i> L.) is a globally important forage crop. It also serves as a vegetable and medicinal herb because of its excellent nutritional quality and significant economic value. Multi-omics data on alfalfa continue to accumulate owing to recent advances in high-throughput techniques, and integrating this information holds great potential for expediting genetic research and facilitating advances in alfalfa agronomic traits. Therefore, we developed a comprehensive database named MODMS (multi-omics database of <i>M. sativa</i>) that incorporates multiple reference genomes, annotations, comparative genomics, transcriptomes, high-quality genomic variants, proteomics, and metabolomics. This report describes our continuously evolving database, which provides researchers with several convenient tools and extensive omics data resources, facilitating the expansion of alfalfa research. Further details regarding the MODMS database are available at https://modms.lzu.edu.cn/.</p>","PeriodicalId":57479,"journal":{"name":"园艺研究(英文)","volume":"11 1","pages":"uhad245"},"PeriodicalIF":7.6000,"publicationDate":"2023-11-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10794946/pdf/","citationCount":"0","resultStr":"{\"title\":\"MODMS: a multi-omics database for facilitating biological studies on alfalfa (<i>Medicago sativa</i> L.).\",\"authors\":\"Longfa Fang, Tao Liu, Mingyu Li, XueMing Dong, Yuling Han, Congzhuo Xu, Siqi Li, Jia Zhang, Xiaojuan He, Qiang Zhou, Dong Luo, Zhipeng Liu\",\"doi\":\"10.1093/hr/uhad245\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Alfalfa (<i>Medicago sativa</i> L.) is a globally important forage crop. It also serves as a vegetable and medicinal herb because of its excellent nutritional quality and significant economic value. Multi-omics data on alfalfa continue to accumulate owing to recent advances in high-throughput techniques, and integrating this information holds great potential for expediting genetic research and facilitating advances in alfalfa agronomic traits. Therefore, we developed a comprehensive database named MODMS (multi-omics database of <i>M. sativa</i>) that incorporates multiple reference genomes, annotations, comparative genomics, transcriptomes, high-quality genomic variants, proteomics, and metabolomics. This report describes our continuously evolving database, which provides researchers with several convenient tools and extensive omics data resources, facilitating the expansion of alfalfa research. Further details regarding the MODMS database are available at https://modms.lzu.edu.cn/.</p>\",\"PeriodicalId\":57479,\"journal\":{\"name\":\"园艺研究(英文)\",\"volume\":\"11 1\",\"pages\":\"uhad245\"},\"PeriodicalIF\":7.6000,\"publicationDate\":\"2023-11-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10794946/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"园艺研究(英文)\",\"FirstCategoryId\":\"1091\",\"ListUrlMain\":\"https://doi.org/10.1093/hr/uhad245\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q1\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"园艺研究(英文)","FirstCategoryId":"1091","ListUrlMain":"https://doi.org/10.1093/hr/uhad245","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q1","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0
摘要
紫花苜蓿(Medicago sativa L.)是全球重要的饲料作物。由于其卓越的营养品质和重要的经济价值,它还可作为蔬菜和药材。由于近年来高通量技术的进步,有关紫花苜蓿的多组学数据不断积累,整合这些信息对于加快遗传研究和促进紫花苜蓿农艺性状的发展具有巨大潜力。因此,我们开发了一个名为 MODMS(Multi-omics database of M. sativa)的综合数据库,其中包含多个参考基因组、注释、比较基因组学、转录组、高质量基因组变异、蛋白质组学和代谢组学。本报告介绍了我们不断发展的数据库,它为研究人员提供了多种便捷的工具和广泛的omics数据资源,促进了苜蓿研究的扩展。有关 MODMS 数据库的更多详情,请访问 https://modms.lzu.edu.cn/。
MODMS: a multi-omics database for facilitating biological studies on alfalfa (Medicago sativa L.).
Alfalfa (Medicago sativa L.) is a globally important forage crop. It also serves as a vegetable and medicinal herb because of its excellent nutritional quality and significant economic value. Multi-omics data on alfalfa continue to accumulate owing to recent advances in high-throughput techniques, and integrating this information holds great potential for expediting genetic research and facilitating advances in alfalfa agronomic traits. Therefore, we developed a comprehensive database named MODMS (multi-omics database of M. sativa) that incorporates multiple reference genomes, annotations, comparative genomics, transcriptomes, high-quality genomic variants, proteomics, and metabolomics. This report describes our continuously evolving database, which provides researchers with several convenient tools and extensive omics data resources, facilitating the expansion of alfalfa research. Further details regarding the MODMS database are available at https://modms.lzu.edu.cn/.