M. Woińska, S. Pawlędzio, A. Hoser, M. Chodkiewicz, K. Woźniak
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TM hydride complexes are also computationally demanding, which makes them difficult to analyze using quantu m crystallographic methods. Hirshfeld atom refinement (HAR) is a quantum crystallographic method that has been proven to locate hydrogen atoms bonded to light elements with accuracy and precision very close to that of neutron experiments, based on standard resolution X - ray data [1]. In some cases, HAR has been reported to improve the positions of hydrogen atoms in TM - H bonds considerably [1, 2], as compared to the Independent Atom Model (IAM). The goal of this study was to evaluate the capabilities of HAR in terms of establishing the positions of hydrogen atoms, especially in TM - H bonds, and to investigate the influence of different parameters adjustable in the refinement on the final result. 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引用次数: 0
摘要
过渡金属(TM)氢化物是一种用途广泛的化合物,在催化、能源转换、寻找储氢材料或超导体等方面有多种应用。因此,利用 X 射线衍射确定这些化合物的结构对许多研究领域都至关重要。然而,用 X 射线定位氢的位置是一个难题,而在氢原子与 TM 原子成键的情况下,这一难题就更加严峻。此外,收集 TM 氢化物的高质量、更不用说高分辨率 X 射线数据是一项艰巨的任务。收集可提供有关氢位置的可靠信息的中子数据也很困难。TM 氢化物复合物的计算要求也很高,这使得它们很难使用量子晶体学方法进行分析。Hirshfeld atom re-rennement(HAR)是一种量子晶体学方法,已被证明可以根据标准分辨率的 X 射线数据找到与轻元素结合的氢原子,其准确度和精确度非常接近中子实验[1]。据报道,在某些情况下,与独立原子模型(IAM)相比,HAR 能显著改善 TM - H 键中氢原子的位置[1, 2]。本研究的目的是评估 HAR 在确定氢原子位置(尤其是 TM - H 键中)方面的能力,并研究重构过程中可调整的不同参数对最终结果的影响。研究考虑了以下因素:包括与晶体环境的相互作用、相对论效应、改变波函数计算所使用的 DFT 函数(B3LYP、PBE、M06 - 2X)以及选择基集。研究考虑的另一个方面是氢热处理的作用。
Challenges and capabilities of quantum crystallography for locating hydrogen atoms in transition metal hydrides
Transition metal (TM) hydrides are versatile compounds with multiple applications in catalysis, energy conversion, and the search for hydrogen storage materials or superconductors. Therefore, determining the structure of these compounds with X -ray diffraction is essential for many areas of research. However, this is hampered by the challenges of locating the position of hydrogen with X - rays, which are even more aggravated in the case of hydrogen atoms bonded to a TM atom. Furthermore, collecting high - quality, let alone high-resolution X -ray d ata, for TM hydrides, is an arduous task. It is also difficult to collect neutron data that could provide reliable information about hydrogen positions. TM hydride complexes are also computationally demanding, which makes them difficult to analyze using quantu m crystallographic methods. Hirshfeld atom refinement (HAR) is a quantum crystallographic method that has been proven to locate hydrogen atoms bonded to light elements with accuracy and precision very close to that of neutron experiments, based on standard resolution X - ray data [1]. In some cases, HAR has been reported to improve the positions of hydrogen atoms in TM - H bonds considerably [1, 2], as compared to the Independent Atom Model (IAM). The goal of this study was to evaluate the capabilities of HAR in terms of establishing the positions of hydrogen atoms, especially in TM - H bonds, and to investigate the influence of different parameters adjustable in the refinement on the final result. The following factors were considered: including interactions with the crystal environment, taking into account relativistic effects, changing the DFT functional used for wave function calculations (B3LYP, PBE, M06 - 2X), and selecting the basis set. Another aspect considered in the study was the role of treatment of hydrogen thermal