Estella F. Yee, Kriti Chopra, Nicolas Grosjean, D. Kumaran, Macon Abernathy, James Byrnes, Lin Yang
{"title":"DUF2470 蓝藻蛋白中锌配位双组氨酸血红素结合位点的结构特征","authors":"Estella F. Yee, Kriti Chopra, Nicolas Grosjean, D. Kumaran, Macon Abernathy, James Byrnes, Lin Yang","doi":"10.1107/s2053273323098303","DOIUrl":null,"url":null,"abstract":"A large family of domain of unknown function (DUF) -containing proteins was recently identified by phylogenomic studies to bind to heme. DUF2470 and related subfamilies of phototroph-specific homologs have diverse heme -related functions, but the structure-function link of DUF2470 itself had yet to be determined. In Synechocystis, DUF2470 forms single domain proteins and were discovered to bind heme and zinc ions, generating a unique two - fold symmetric, zinc-bound bis-histidine heme site. Structural and spectroscopic characterizations of the wild -type and variants lacking conserved histidine residues elucidate the importance of zinc-binding and histidine residues fo r heme-binding activity. Results here supplement in vivo experiments and observed phenotypes that implicate DUF2470 in heme-dependent regulation of electron transport chains.","PeriodicalId":6903,"journal":{"name":"Acta Crystallographica Section A Foundations and Advances","volume":"139 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Structural characterization of a zinc-coordinated bis-histidine heme-binding site in the DUF2470 cyanobacterial protein\",\"authors\":\"Estella F. Yee, Kriti Chopra, Nicolas Grosjean, D. Kumaran, Macon Abernathy, James Byrnes, Lin Yang\",\"doi\":\"10.1107/s2053273323098303\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"A large family of domain of unknown function (DUF) -containing proteins was recently identified by phylogenomic studies to bind to heme. DUF2470 and related subfamilies of phototroph-specific homologs have diverse heme -related functions, but the structure-function link of DUF2470 itself had yet to be determined. In Synechocystis, DUF2470 forms single domain proteins and were discovered to bind heme and zinc ions, generating a unique two - fold symmetric, zinc-bound bis-histidine heme site. Structural and spectroscopic characterizations of the wild -type and variants lacking conserved histidine residues elucidate the importance of zinc-binding and histidine residues fo r heme-binding activity. Results here supplement in vivo experiments and observed phenotypes that implicate DUF2470 in heme-dependent regulation of electron transport chains.\",\"PeriodicalId\":6903,\"journal\":{\"name\":\"Acta Crystallographica Section A Foundations and Advances\",\"volume\":\"139 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-07-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Acta Crystallographica Section A Foundations and Advances\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1107/s2053273323098303\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Acta Crystallographica Section A Foundations and Advances","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1107/s2053273323098303","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Structural characterization of a zinc-coordinated bis-histidine heme-binding site in the DUF2470 cyanobacterial protein
A large family of domain of unknown function (DUF) -containing proteins was recently identified by phylogenomic studies to bind to heme. DUF2470 and related subfamilies of phototroph-specific homologs have diverse heme -related functions, but the structure-function link of DUF2470 itself had yet to be determined. In Synechocystis, DUF2470 forms single domain proteins and were discovered to bind heme and zinc ions, generating a unique two - fold symmetric, zinc-bound bis-histidine heme site. Structural and spectroscopic characterizations of the wild -type and variants lacking conserved histidine residues elucidate the importance of zinc-binding and histidine residues fo r heme-binding activity. Results here supplement in vivo experiments and observed phenotypes that implicate DUF2470 in heme-dependent regulation of electron transport chains.