基于 RNA-seq 技术分析 PQ 诱导 SD 大鼠急性肺损伤信号通路的异常表达。

IF 2 4区 医学 Q4 TOXICOLOGY
Inhalation Toxicology Pub Date : 2024-01-01 Epub Date: 2024-01-04 DOI:10.1080/08958378.2023.2300373
Nan Li, Yue Huang, Yang Yi, Jin Qian, Qi Li, Shuang-Qin Xu, Hang-Fei Wang, Xin-Xin Wu, Ji-Chao Peng, Li-Hua Li, Jin-Jian Yao, Xiao-Ran Liu
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引用次数: 0

摘要

背景:百草枯(PQ)具有高效除草作用,在农业生产中发挥着重要作用。然而,百草枯会导致中毒者多器官衰竭,其中肺部的损害最为显著,最终导致死亡。由于基因层面的研究很少,因此百草枯暴露导致的具体基因变化尚不清楚:方法:在Sprague Dawley(SD)大鼠中建立百草枯中毒模型,将SD大鼠随机分为对照组、百草枯(PQ)中毒组和2,6-二磺酸蒽醌(AH2QDS)治疗组。然后,对数据进行筛选和质量控制,与参考基因进行比较,优化基因结构,在基因表达水平上进行富集,最后筛选出具有显著差异的基因富集信号通路:结果:本综述对百草枯中毒的Sprague Dawley(SD)大鼠肺组织进行了RNA-seq分析,发现差异表达基因主要富集于PI3K-AKT、cGMP-PKG、MAPK、Focal adhesion等信号通路:总结了这些差异表达基因所富集的信号通路,并概述了百草枯中毒急性肺损伤中通过这些通路介导的重要机制,从而确定了AH2QDS治疗百草枯暴露所致急性肺损伤的重要靶点,这些信息将用于支持后续对百草枯作用机制的深入研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Analysis of abnormal expression of signaling pathways in PQ-induced acute lung injury in SD rats based on RNA-seq technology.

Background: Paraquat (PQ) plays an important role in agricultural production due to its highly effective herbicidal effect. However, it has led to multiple organ failure in those who have been poisoned, with damage most notable in the lungs and ultimately leading to death. Because of little research has been performed at the genetic level, and therefore, the specific genetic changes caused by PQ exposure are unclear.Methods: Paraquat poisoning model was constructed in Sprague Dawley (SD) rats, and SD rats were randomly divided into Control group, paraquat (PQ) poisoning group and Anthrahydroquinone-2,6-disulfonate (AH2QDS) treatment group. Then, the data was screened and quality controlled, compared with reference genes, optimized gene structure, enriched at the gene expression level, and finally, signal pathways with significantly different gene enrichment were screened.Results: This review reports on lung tissues from paraquat-intoxicated Sprague Dawley (SD) rats that were subjected to RNA-seq, the differentially expressed genes were mainly enriched in PI3K-AKT, cGMP-PKG, MAPK, Focal adhesion and other signaling pathways.Conclusion: The signaling pathways enriched with these differentially expressed genes are summarized, and the important mechanisms mediated through these pathways in acute lung injury during paraquat poisoning are outlined to identify important targets for AH2QDS treatment of acute lung injury due to paraquat exposure, information that will be used to support a subsequent in-depth study on the mechanism of PQ action.

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来源期刊
Inhalation Toxicology
Inhalation Toxicology 医学-毒理学
CiteScore
4.10
自引率
4.80%
发文量
38
审稿时长
6-12 weeks
期刊介绍: Inhalation Toxicology is a peer-reviewed publication providing a key forum for the latest accomplishments and advancements in concepts, approaches, and procedures presently being used to evaluate the health risk associated with airborne chemicals. The journal publishes original research, reviews, symposia, and workshop topics involving the respiratory system’s functions in health and disease, the pathogenesis and mechanism of injury, the extrapolation of animal data to humans, the effects of inhaled substances on extra-pulmonary systems, as well as reliable and innovative models for predicting human disease.
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