Sebastián Maximiliano Rossi, Cristian Alberto Ferri, Pedro Darío Zapata
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引用次数: 0
摘要
Ilex paraguariensis St. Hil.是一种雌雄异株树,原产于南美洲的亚热带森林,其叶子和小树枝经加工后可制成刺激性强且广受欢迎的 "马黛茶"。在对黄嘌呤生物合成途径的转录本组、基因组和系统发育进行探索的基础上,通过与其他重要农艺植物进行比较分析,发现了假基因。以 INTA EAA-Cerro Azul de Misiones 开发的精英材料为参考基因组,并利用 Debat 等人在 2014 年测序的转录组提供的数据,对帕拉瓜里ensis 的转录本进行了分析。在研究耶巴马黛茶在咖啡因转化代谢过程中呈现的不同类型的甲基转移酶时,对几种 SABATH 酶进行了分类,其中三种对应于咖啡因合成酶组中的假基因。
First report of pseudogenes of SABATH enzymes from xanthinesmetabolic pathway in Ilex paraguariensis
Ilex paraguariensis St. Hil. is a dioecious tree native to the subtropical forests of South America, whose leaves and small branches are processed to prepare the stimulating and popular infusion known as “mate”. On the basis of the exploration, from the transcriptomic, genomic and phylogenetic perspective of the xanthine biosynthetic pathway, it was possible to discover pseudogenes through comparative analysis with other plants of agronomic importance.
The transcripts of I. paraguariensis were analyzed using the elite material developed by INTA EAA-Cerro Azul de Misiones as reference genome and the data provided from the transcriptome sequenced by Debat et. al in 2014.
A phylogenetic examination of enzymes from a large family of SABATH genes that catalyze the methylation of oxygen atoms of a wide variety of carboxylic acids was performed. The most recently evolved genes of the SABATH family are those corresponding to the Xanthine Methyltransferases (XMT) and Caffeine Synthase (CS) pathways.
Investigating the different types of methyltransferases that yerba mate presents in the metabolic process of caffeine conversion, several SABATH enzymes were categorized, of which three corresponded to pseudogenes within the caffeine synthase group.