茄科植物ALOG基因家族的全基因组鉴定及进化观点。

IF 1.7 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Genetics and Molecular Biology Pub Date : 2023-11-24 eCollection Date: 2023-01-01 DOI:10.1590/1415-4757-GMB-2023-0142
Caroline Turchetto, Ariadne de Castro Silvério, Edgar Luis Waschburger, Maria Eduarda Gonçalves Lacerda, Isadora Vieira Quintana, Andreia Carina Turchetto-Zolet
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引用次数: 0

摘要

ALOG基因家族以其最早发现的成员(拟南芥LSH1和Oryza G1)命名,编码一类转录因子(TF),其特征是存在高度保守的ALOG结构域。这些蛋白存在于多种植物中,在植物生长发育和花序形态多样化中起调节作用。这些基因在一些植物物种中的功能特征表明它们与花的结构有关。在这项研究中,我们使用全基因组和系统发育方法来深入了解ALOG基因家族的植物起源、多样化和功能方面。在77种绿芽植物中共鉴定出648个ALOG同源基因,并利用最大似然系统发育分析推断出它们的进化关系。结果表明,在被子植物的进化过程中,ALOG基因家族经历了多轮基因复制和多样化。此外,我们还在茄科植物中发现了3个功能同源基团。该研究提供了对ALOG基因家族的进化史和功能多样化的深入了解,有助于理解被子植物花结构的机制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Genome-wide identification and evolutionary view of ALOG gene family in Solanaceae.

The ALOG gene family, which was named after its earliest identified members ( Arabidopsis LSH1 and Oryza G1), encodes a class of transcription factors (TF) characterized by the presence of a highly conserved ALOG domain. These proteins are found in various plant species playing regulatory roles in plant growth, development, and morphological diversification of inflorescence. The functional characterization of these genes in some plant species has demonstrated their involvement in floral architecture. In this study, we used a genome-wide and phylogenetic approach to gain insights into plants' origin, diversification, and functional aspects of the ALOG gene family. In total, 648 ALOG homologous genes were identified in 77 Viridiplantae species, and their evolutionary relationships were inferred using maximum likelihood phylogenetic analyses. Our results suggested that the ALOG gene family underwent several rounds of gene duplication and diversification during angiosperm evolution. Furthermore, we found three functional orthologous groups in Solanaceae species. The study provides insights into the evolutionary history and functional diversification of the ALOG gene family, which could aid in understanding the mechanisms underlying floral architecture in angiosperms.

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来源期刊
Genetics and Molecular Biology
Genetics and Molecular Biology 生物-生化与分子生物学
CiteScore
4.20
自引率
4.80%
发文量
111
审稿时长
3 months
期刊介绍: Genetics and Molecular Biology (formerly named Revista Brasileira de Genética/Brazilian Journal of Genetics - ISSN 0100-8455) is published by the Sociedade Brasileira de Genética (Brazilian Society of Genetics). The Journal considers contributions that present the results of original research in genetics, evolution and related scientific disciplines. Manuscripts presenting methods and applications only, without an analysis of genetic data, will not be considered.
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