体内内窥镜使基于机器学习的预测对晚期直肠癌患者新辅助放化疗的反应成为可能

Q4 Biochemistry, Genetics and Molecular Biology
Alan Sabino, Adriana Safatle-Ribeiro, Suzylaine Lima, Carlos Marques, Fauze Maluf-Filho, Alexandre Ramos
{"title":"体内内窥镜使基于机器学习的预测对晚期直肠癌患者新辅助放化疗的反应成为可能","authors":"Alan Sabino, Adriana Safatle-Ribeiro, Suzylaine Lima, Carlos Marques, Fauze Maluf-Filho, Alexandre Ramos","doi":"10.1615/critrevoncog.2023050075","DOIUrl":null,"url":null,"abstract":"Probe-based confocal laser endomicroscopy (pCLE) enables in vivo cell-level observation in the colorectal mucosa (CM) during colonoscopy. Assessment of pCLE images is limited by endoscopists’ availability, training, and prevalence of qualitative criteria. Artificial intelligence tools may improve the accuracy of analysis of pCLE movies of the CM contributing for enhanced prognostics. Motiro is an automated unified framework for statistics-based digital pathology of pCLE movies of the CM. Motiro performs a batch mode analysis of pCLE movies for automatic characterization of a tumoral region and its surroundings which enables classifying a patient as responsive to neoadjuvant chemoradiotherapy (neoCRT) or not based on pre-neoCRT pCLE movies. The processing flow is as follows: Motiro builds histograms of fluorescence of all frames; computes the fractal dimension of the contours appearing in frames of videos reporting the tumoral region and its surrounding mucosa; the generated features are feed in Machine Learning (ML) algorithms which aim to predict response to neoCRT. We analyze movies of 47 patients having locally advanced rectal cancer. Accuracy on classification of patients responding or not to neoCRT, based on analysis of images of the tumoral regions or their surrounding areas respectively reach ~0.62 or ~ 0.70. Feature analysis shows that the main contributors for the classification are the fluorescence intensities. We employed a ML framework for predicting whether an advanced rectal cancer patient will respond or not to neoCRT. We demonstrate that the analysis of the mucosa surrounding the tumor region enables better predictive power.","PeriodicalId":35617,"journal":{"name":"Critical Reviews in Oncogenesis","volume":"136 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"In vivo endomicroscopy enables machine learning-based prediction of responsiveness to neoadjuvant chemoradiotherapy by advanced rectal cancer patients\",\"authors\":\"Alan Sabino, Adriana Safatle-Ribeiro, Suzylaine Lima, Carlos Marques, Fauze Maluf-Filho, Alexandre Ramos\",\"doi\":\"10.1615/critrevoncog.2023050075\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Probe-based confocal laser endomicroscopy (pCLE) enables in vivo cell-level observation in the colorectal mucosa (CM) during colonoscopy. Assessment of pCLE images is limited by endoscopists’ availability, training, and prevalence of qualitative criteria. Artificial intelligence tools may improve the accuracy of analysis of pCLE movies of the CM contributing for enhanced prognostics. Motiro is an automated unified framework for statistics-based digital pathology of pCLE movies of the CM. Motiro performs a batch mode analysis of pCLE movies for automatic characterization of a tumoral region and its surroundings which enables classifying a patient as responsive to neoadjuvant chemoradiotherapy (neoCRT) or not based on pre-neoCRT pCLE movies. The processing flow is as follows: Motiro builds histograms of fluorescence of all frames; computes the fractal dimension of the contours appearing in frames of videos reporting the tumoral region and its surrounding mucosa; the generated features are feed in Machine Learning (ML) algorithms which aim to predict response to neoCRT. We analyze movies of 47 patients having locally advanced rectal cancer. Accuracy on classification of patients responding or not to neoCRT, based on analysis of images of the tumoral regions or their surrounding areas respectively reach ~0.62 or ~ 0.70. Feature analysis shows that the main contributors for the classification are the fluorescence intensities. We employed a ML framework for predicting whether an advanced rectal cancer patient will respond or not to neoCRT. We demonstrate that the analysis of the mucosa surrounding the tumor region enables better predictive power.\",\"PeriodicalId\":35617,\"journal\":{\"name\":\"Critical Reviews in Oncogenesis\",\"volume\":\"136 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Critical Reviews in Oncogenesis\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1615/critrevoncog.2023050075\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"Biochemistry, Genetics and Molecular Biology\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Critical Reviews in Oncogenesis","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1615/critrevoncog.2023050075","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 0

摘要

基于探针的共聚焦激光内镜(pCLE)可以在结肠镜检查期间观察结肠粘膜(CM)的体内细胞水平。内窥镜医师的可用性、培训和定性标准的普遍性限制了对pCLE图像的评估。人工智能工具可以提高CM的pCLE影像分析的准确性,有助于增强预后。Motiro是一个自动统一的框架,用于基于统计的ccm的pCLE电影的数字病理学。Motiro对pCLE影像进行批量模式分析,以自动表征肿瘤区域及其周围环境,从而根据新辅助放化疗(neoCRT)前的pCLE影像,将患者分类为对新辅助放化疗(neoCRT)有反应或无反应。处理流程如下:Motiro构建所有帧的荧光直方图;计算在报告肿瘤区域及其周围粘膜的视频帧中出现的轮廓的分形维数;生成的特征在机器学习(ML)算法中提供,旨在预测对neoCRT的响应。我们分析了47例局部晚期直肠癌患者的影像。基于肿瘤区域或其周围区域的图像分析对neoCRT反应或不反应患者的分类准确率分别达到~0.62或~ 0.70。特征分析表明,荧光强度是影响分类的主要因素。我们采用ML框架来预测晚期直肠癌患者是否对新crt有反应。我们证明了对肿瘤周围粘膜的分析可以提高预测能力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
In vivo endomicroscopy enables machine learning-based prediction of responsiveness to neoadjuvant chemoradiotherapy by advanced rectal cancer patients
Probe-based confocal laser endomicroscopy (pCLE) enables in vivo cell-level observation in the colorectal mucosa (CM) during colonoscopy. Assessment of pCLE images is limited by endoscopists’ availability, training, and prevalence of qualitative criteria. Artificial intelligence tools may improve the accuracy of analysis of pCLE movies of the CM contributing for enhanced prognostics. Motiro is an automated unified framework for statistics-based digital pathology of pCLE movies of the CM. Motiro performs a batch mode analysis of pCLE movies for automatic characterization of a tumoral region and its surroundings which enables classifying a patient as responsive to neoadjuvant chemoradiotherapy (neoCRT) or not based on pre-neoCRT pCLE movies. The processing flow is as follows: Motiro builds histograms of fluorescence of all frames; computes the fractal dimension of the contours appearing in frames of videos reporting the tumoral region and its surrounding mucosa; the generated features are feed in Machine Learning (ML) algorithms which aim to predict response to neoCRT. We analyze movies of 47 patients having locally advanced rectal cancer. Accuracy on classification of patients responding or not to neoCRT, based on analysis of images of the tumoral regions or their surrounding areas respectively reach ~0.62 or ~ 0.70. Feature analysis shows that the main contributors for the classification are the fluorescence intensities. We employed a ML framework for predicting whether an advanced rectal cancer patient will respond or not to neoCRT. We demonstrate that the analysis of the mucosa surrounding the tumor region enables better predictive power.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Critical Reviews in Oncogenesis
Critical Reviews in Oncogenesis Biochemistry, Genetics and Molecular Biology-Cancer Research
CiteScore
1.70
自引率
0.00%
发文量
17
期刊介绍: The journal is dedicated to extensive reviews, minireviews, and special theme issues on topics of current interest in basic and patient-oriented cancer research. The study of systems biology of cancer with its potential for molecular level diagnostics and treatment implies competence across the sciences and an increasing necessity for cancer researchers to understand both the technology and medicine. The journal allows readers to adapt a better understanding of various fields of molecular oncology. We welcome articles on basic biological mechanisms relevant to cancer such as DNA repair, cell cycle, apoptosis, angiogenesis, tumor immunology, etc.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信