Invasive陆地无脊椎动物在水和土壤中使用靶向eDNA方法检测

IF 3.8 2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION
Neobiota Pub Date : 2023-04-03 DOI:10.3897/neobiota.83.98898
Villacorta-Rath, Cecilia, Lach, Lori, Andrade-Rodriguez, Natalia, Burrows, Damien, Gleeson, Dianne, Trujillo-González, Alejandro
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引用次数: 0

摘要

陆地入侵的无脊椎动物可以迅速占领新的地区,对生物多样性、经济和生活方式造成不利影响。靶向环境DNA (eDNA)方法由于其对少数个体的敏感性,可以构成一种早期检测工具。我们假设陆地径流会将eDNA从陆地运输到邻近的水体中,并使用入侵的黄疯蚁(Anoplolepis gracilipes)作为模型物种来验证这一假设。我们从四个相邻的水体(<在降雨事件后进行eDNA分析。我们还从已知侵染地区收集了土壤样本,并测试了五种eDNA提取方法,以确定它们从土壤中提取eDNA的效率。水样导致黄色疯狂蚂蚁eDNA扩增阳性(所有地点的20-100%现场重复),即使在距离肉眼检测到蚂蚁300米的地点也是如此。从蚂蚁过境区取样的土壤样本比从蚁巢入口取样的土壤样本产生假阴性的百分比更高。土壤中未纯化的DNA提取物也会导致假阴性检测,只有在对DNA提取物进行纯化步骤后,我们才能在所有方法和位点的40-100%的现场重复中检测到黄疯蚁的eDNA。这是第一个实证研究表明,陆地无脊椎动物的eDNA可以成功地从邻近或下游水体中分离和扩增。我们的结果表明,eDNA有潜力成为从土壤和水中检测陆源无脊椎动物的有用方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Invasive terrestrial invertebrate detection in water and soil using a targeted eDNA approach
Terrestrial invasive invertebrates can rapidly colonise new areas, causing detrimental effects on biodiversity, economy and lifestyle. Targeted environmental DNA (eDNA) methods could constitute an early detection tool given their sensitivity to small numbers of individuals. We hypothesised that terrestrial runoff would transport eDNA from the land into adjacent waterbodies and used the invasive yellow crazy ant ( Anoplolepis gracilipes ) as a model species to test this hypothesis. We collected water samples from four waterbodies adjacent (&lt; 10 m from the creek edge) to infestations following rainfall events for eDNA analysis. We also collected soil samples from areas of known infestations and tested five eDNA extraction methods to determine their efficiency to extract eDNA from soil. Water samples resulted in positive yellow crazy ant eDNA amplification (20–100% field replicates across all sites), even at one site located 300 m away from where ants had been detected visually. Soil samples resulted in a higher percentage of false negatives when sampled from ant transit areas than from nest entrances. Unpurified DNA extracts from soil also resulted in false negative detections and only after applying a purification step of DNA extracts, did we detect yellow crazy ant eDNA in 40–100% of field replicates across all methods and sites. This is the first study to empirically show that eDNA from a terrestrial invertebrate can be successfully isolated and amplified from adjacent or downstream waterbodies. Our results indicate that eDNA has the potential to be a useful method for detecting terrestrial invertebrates from soil and water.
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来源期刊
Neobiota
Neobiota Agricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics
CiteScore
8.10
自引率
7.80%
发文量
0
审稿时长
6 weeks
期刊介绍: NeoBiota is a peer-reviewed, open-access, rapid online journal launched to accelerate research on alien species and biological invasions: aquatic and terrestrial, animals, plants, fungi and micro-organisms. The journal NeoBiota is a continuation of the former NEOBIOTA publication series; for volumes 1-8 see http://www.oekosys.tu-berlin.de/menue/neobiota All articles are published immediately upon editorial approval. All published papers can be freely copied, downloaded, printed and distributed at no charge for the reader. Authors are thus encouraged to post the pdf files of published papers on their homepages or elsewhere to expedite distribution. There is no charge for color.
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