Yannic Fischler, Thomas Kleiner, Christian Bischof, Jeremie Schmiedel, Roiy Sayag, Raban Emunds, Lennart Frederik Oestreich, Angelika Humbert
{"title":"冰下水文有约束-无约束含水层系统模型的并行实现:设计、验证和性能分析(CUAS-MPI v0.1.0)","authors":"Yannic Fischler, Thomas Kleiner, Christian Bischof, Jeremie Schmiedel, Roiy Sayag, Raban Emunds, Lennart Frederik Oestreich, Angelika Humbert","doi":"10.5194/gmd-16-5305-2023","DOIUrl":null,"url":null,"abstract":"Abstract. The subglacial hydrological system affects (i) the motion of ice sheets through sliding, (ii) the location of lakes at the ice margin, and (iii) the ocean circulation by freshwater discharge directly at the grounding line or (iv) via rivers flowing over land. For modeling this hydrology system, a previously developed porous-media concept called the confined–unconfined aquifer system (CUAS) is used. To allow for realistic simulations at the ice sheet scale, we developed CUAS-MPI, an MPI-parallel C/C++ implementation of CUAS (MPI: Message Passing Interface), which employs the Portable, Extensible Toolkit for Scientific Computation (PETSc) infrastructure for handling grids and equation systems. We validate the accuracy of the numerical results by comparing them with a set of analytical solutions to the model equations, which involve two types of boundary conditions. We then investigate the scaling behavior of CUAS-MPI and show that CUAS-MPI scales up to 3840 MPI processes running a realistic Greenland setup on the Lichtenberg HPC system. Our measurements also show that CUAS-MPI reaches a throughput comparable to that of ice sheet simulations, e.g., the Ice-sheet and Sea-level System Model (ISSM). Lastly, we discuss opportunities for ice sheet modeling, explore future coupling possibilities of CUAS-MPI with other simulations, and consider throughput bottlenecks and limits of further scaling.","PeriodicalId":12799,"journal":{"name":"Geoscientific Model Development","volume":"3 1 1","pages":"0"},"PeriodicalIF":4.0000,"publicationDate":"2023-09-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"A parallel implementation of the confined–unconfined aquifer system model for subglacial hydrology: design, verification, and performance analysis (CUAS-MPI v0.1.0)\",\"authors\":\"Yannic Fischler, Thomas Kleiner, Christian Bischof, Jeremie Schmiedel, Roiy Sayag, Raban Emunds, Lennart Frederik Oestreich, Angelika Humbert\",\"doi\":\"10.5194/gmd-16-5305-2023\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Abstract. The subglacial hydrological system affects (i) the motion of ice sheets through sliding, (ii) the location of lakes at the ice margin, and (iii) the ocean circulation by freshwater discharge directly at the grounding line or (iv) via rivers flowing over land. For modeling this hydrology system, a previously developed porous-media concept called the confined–unconfined aquifer system (CUAS) is used. To allow for realistic simulations at the ice sheet scale, we developed CUAS-MPI, an MPI-parallel C/C++ implementation of CUAS (MPI: Message Passing Interface), which employs the Portable, Extensible Toolkit for Scientific Computation (PETSc) infrastructure for handling grids and equation systems. We validate the accuracy of the numerical results by comparing them with a set of analytical solutions to the model equations, which involve two types of boundary conditions. We then investigate the scaling behavior of CUAS-MPI and show that CUAS-MPI scales up to 3840 MPI processes running a realistic Greenland setup on the Lichtenberg HPC system. Our measurements also show that CUAS-MPI reaches a throughput comparable to that of ice sheet simulations, e.g., the Ice-sheet and Sea-level System Model (ISSM). 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A parallel implementation of the confined–unconfined aquifer system model for subglacial hydrology: design, verification, and performance analysis (CUAS-MPI v0.1.0)
Abstract. The subglacial hydrological system affects (i) the motion of ice sheets through sliding, (ii) the location of lakes at the ice margin, and (iii) the ocean circulation by freshwater discharge directly at the grounding line or (iv) via rivers flowing over land. For modeling this hydrology system, a previously developed porous-media concept called the confined–unconfined aquifer system (CUAS) is used. To allow for realistic simulations at the ice sheet scale, we developed CUAS-MPI, an MPI-parallel C/C++ implementation of CUAS (MPI: Message Passing Interface), which employs the Portable, Extensible Toolkit for Scientific Computation (PETSc) infrastructure for handling grids and equation systems. We validate the accuracy of the numerical results by comparing them with a set of analytical solutions to the model equations, which involve two types of boundary conditions. We then investigate the scaling behavior of CUAS-MPI and show that CUAS-MPI scales up to 3840 MPI processes running a realistic Greenland setup on the Lichtenberg HPC system. Our measurements also show that CUAS-MPI reaches a throughput comparable to that of ice sheet simulations, e.g., the Ice-sheet and Sea-level System Model (ISSM). Lastly, we discuss opportunities for ice sheet modeling, explore future coupling possibilities of CUAS-MPI with other simulations, and consider throughput bottlenecks and limits of further scaling.
期刊介绍:
Geoscientific Model Development (GMD) is an international scientific journal dedicated to the publication and public discussion of the description, development, and evaluation of numerical models of the Earth system and its components. The following manuscript types can be considered for peer-reviewed publication:
* geoscientific model descriptions, from statistical models to box models to GCMs;
* development and technical papers, describing developments such as new parameterizations or technical aspects of running models such as the reproducibility of results;
* new methods for assessment of models, including work on developing new metrics for assessing model performance and novel ways of comparing model results with observational data;
* papers describing new standard experiments for assessing model performance or novel ways of comparing model results with observational data;
* model experiment descriptions, including experimental details and project protocols;
* full evaluations of previously published models.