透明质酸对COVID-19牙周炎患者白细胞介素-6 (7DC8蛋白)的分子对接研究

Ade Ismail, Syafirudin Aulia Azhar
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摘要

冠状病毒病2019 (COVID-19)是一种由冠状病毒即SARS-CoV-2引起的新型疾病。该病毒通过血管紧张素转换酶受体(ACE2)进入宿主体内。最近的证据表明,牙周炎患者牙周袋内的沟液可能是SARS-CoV-2的来源,也是COVID-19确诊患者口腔病毒载量增加的潜在宿主。ACE-2主要在舌背和牙龈的层状鳞状上皮中表达。龈沟液是SARS-CoV-2通过龈沟液(GCF)进入牙周袋上皮的入口。透明质酸(HA)是一种高分子重多糖(糖胺聚糖),具有抗炎、加速伤口愈合等多种功能。它可以降低几种细胞因子的水平。本研究利用MOE 2015.10软件,以IL-6受体(7DC8)为蛋白模型,通过分子对接研究,分析牙周炎患者HA与IL-6冠状病毒受体的相互作用,预测HA与10种姿态的结合。通过充电法制备7DC8蛋白,用RMSD <2Å进行验证,表明该方法是有效的。本研究结果表明,HA与IL-6受体之间通过氨基酸残基相互作用在亮氨酸98(键能-0.7 kcal/mol)、丝氨酸52(键能-1.7 kcal/mol)、甘氨酸53(键能-1.5 kcal/mol)和甘氨酸299(键能-1.6 kcal/mol)上发生相互作用。基于分子对接研究,透明质酸与冠状病毒在牙周炎的IL-6受体上相互作用,可能被用作COVID-19合并牙周炎的治疗选择。总之,透明质酸有可能成为COVID-19牙周炎患者首选的抗炎药物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Molecular docking study of hyaluronic acid against interleukin-6 (7DC8 protein) in COVID-19 patients with periodontitis
Coronavirus disease 2019 (COVID-19) is a new disease caused by a coronavirus, namely SARS-CoV-2. This virus was entered inside the host by angiotensin-converting enzyme receptors (ACE2). Recent evidence suggests that sulcus fluid in the periodontal pockets of patients with periodontitis may be a source of SARS-CoV-2 and a potential reservoir for increasing oral viral load in patients with confirmed COVID-19. ACE-2 is expressed in stratified squamous epithelium mainly on the dorsal tongue and gingiva. The gingival sulcular epithelium is the entry point for SARS-CoV-2 into the periodontal pocket epithelium through the gingival crevicular fluid (GCF). Hyaluronic acid (HA) is a high molecule of heavy polysaccharide (glycosaminoglycan) which has several functions, such as anti-inflammatory and accelerated wound healing. It could decrease the levels of several cytokines. This study aims to analyze the interaction of HA against the IL-6 coronavirus receptor in periodontitis through a molecular docking study using MOE 2015.10 software with IL-6 receptor (7DC8) as the protein model to predict the binding of HA with 10 poses. The 7DC8 protein was prepared by adding charge and the validation method was performed with RMSD <2Å which indicates this method is valid. The results of this study showed that there are interaction between HA and the IL-6 receptor via amino acid residue interaction at the Leucine 98 (bond energy -0.7 kcal/mol), Serine 52 (bond energy -1.7 kcal/mol), Glycine 53 (bond energy -1.5 kcal/mol), and Glycine 299 (bond energy -1.6 kcal/mol). HA has an interaction with coronavirus at the IL-6 receptor of periodontitis based on molecular docking study and can potentially be used as a therapeutic option in COVID-19 with periodontitis. In conclusion, hyaluronic acid has the potential as an anti-inflammatory drug of choice in COVID-19 patients with periodontitis.
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