基于多算法的对接揭示咪唑烷酰脲作为肺癌多靶点抑制剂

Shaban Ahmad, K. Raza
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引用次数: 0

摘要

当前位置肺癌是最致命的癌症之一,每年在世界范围内导致180多万人死亡,是世界卫生组织的优先名单。在目前的情况下,当癌细胞对药物产生抗药性时,药物的效果就会降低,病人就会处于脆弱的状态。为了克服这种情况,研究人员正在不断研究新的药物和药物,以帮助对抗耐药性并改善患者的预后。本研究选取肺癌的5种主要蛋白RSK4 n-末端激酶、鸟苷酸激酶、周期蛋白依赖性激酶2、激酶CK2全酶和肿瘤坏死因子α,采用HTVS、标准精度和超精确3种基于glide的对接算法,对制备的药物库库中155,888个化合物进行筛选,对接评分范围为−5.422 ~−8.432 Kcal/mol。通过MM \ GBSA计算对这些姿态进行过滤,确定咪唑烷基脲C11H16N8O8 (DB14075)为肺癌多靶点抑制剂,并通过ADMET和相互作用模式指纹图谱等高级计算进行验证。在此基础上,利用Jaguar和MD Simulation对该化合物进行优化,并在至少100 ns的时间内进行NPT集成类优化,分析其偏差、波动和可能的相互作用,以保证其在A549细胞系上的稳定性和实验验证。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Multialgorithm-Based Docking Reveals Imidazolidinyl Urea as a Multitargeted Inhibitor for Lung Cancer
: Lung cancer is one of the deadliest cancers, responsible for more than 1.80 million deaths annually worldwide, and it is on the priority list of the WHO. In the current scenario, when cancer cells become resistant to drugs, making them less effective and leaving the patient in vulnerable conditions. To overcome this situation, researchers are constantly working on new drugs and medications that can help fight drug resistance and improve patients’ outcomes. In this study, we have taken five main proteins of lung cancer, namely RSK4 N-terminal kinase, guanylate kinase, cyclin-dependent kinase 2, kinase CK2 holoenzyme, and tumour necrosis factor-alpha, and screened the prepared Drug Bank library with 155,888 compounds against all using three Glide-based docking algorithms, namely HTVS, standard precision and extra precise, with a docking score ranging from − 5.422 to − 8.432 Kcal/mol. The poses were filtered with the MM \ GBSA calculations, which helped to identify Imidazolidinyl urea C11H16N8O8 (DB14075) as a multitargeted inhibitor for lung cancer, validated with advanced computations such as ADMET and interaction pattern fingerprints. Further, it is proposed to optimise the compound with Jaguar and MD Simulation for at least 100 ns with NPT ensemble class to analyse the deviation and fluctuations and possible interactions for stability and experimental validation on the A549 cell line.
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