传记草图

Robert E. eRA
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引用次数: 150

摘要

Khatri博士是斯坦福大学医学系免疫、移植和感染研究所和生物医学信息学研究中心的助理教授。他在生物信息学、计算生物学和转化医学领域拥有超过15年的专业经验。他积极与斯坦福大学校园和其他研究所的许多研究人员合作,目标是传播和实施新发明的诊断标记和治疗靶点。他开发了整合和分析高通量基因组学和蛋白质组学数据的方法。他以高通量分子数据的本体论和通路分析的发展以及利用公共数据进行综合多队列分析以识别诊断和治疗性生物标志物而闻名。Khatri博士开发了第一个工具Onto-Express,用于使用Gene Ontology分析微阵列数据。他扩展了他在本体论分析方面的工作,开发了一套基于网络的开放访问工具,Onto-Tools。目前,全球有超过15,000人注册为Onto-Tools用户。他最近的工作重点是开发综合的计算方法,多队列分析公开可用的数据,以增加样本量,并更好地解释在现实世界的患者群体中观察到的异质性。使用这些方法,他整合了来自多个中心的数据集,这些中心由不同的患者队列组成,具有不同的生物和技术混杂因素(i),以确定所有移植器官、癌症(胰腺癌、小细胞和非小细胞肺癌)和传染病(败血症、呼吸道病毒感染)的急性排斥反应的高度特异性和敏感性生物标志物。(ii)建议fda批准的用于治疗移植患者的药物重新定位,以及(iii)确定可能成为潜在药物靶点的参与非小细胞肺癌和胰腺癌癌变的新基因。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Biographical Sketch
A. Personal Statement Dr. Khatri is an Assistant Professor at the Institute for Immunity, Transplantation, and Infection and the Center for Biomedical Informatics Research, Department of Medicine at Stanford University. Dr. Khatri has more than 15 years of professional experience in the areas of bioinformatics, computational biology, and translational medicine. He actively collaborates with many investigators on the Stanford campus, and at other institutes, with a goal to disseminate and implemented newly-invented diagnostic markers and therapeutic targets. He develops methods for the integration and analysis of high throughput genomics and proteomics data. He is well known for work on the development of ontological and pathway analysis of high throughput molecular data, and leveraging publicly available data for integrated, multi-cohort analyses for identification of diagnostic and therapeutic biomarkers. Dr. Khatri developed the first tool, Onto-Express, for analysis of microarray data using Gene Ontology. He expanded his work in ontological analysis to develop a suite of web-based open access tools, Onto-Tools. Currently, more than 15,000 people around the world are registered as Onto-Tools users. His recent work is focused on developing computational methods for integrated, multi-cohort analysis of publically available data to increase the sample size as well as better account for heterogeneity observed in real world patient population. Using these methods, he has integrated data sets from multiple centers consisting of distinct patient cohorts with different biological and technical confounders (i) to identify highly specific and sensitive biomarkers for acute rejection across all transplanted organs, cancers (pancreatic cancer, small cell and non-small cell lung cancer), and infectious diseases (sepsis, respiratory viral infections, tuberculosis) (ii) to suggest repositioning of FDA-approved drugs for treating transplant patients, and (iii) to identify novel gene involved in non small cell lung cancer and pancreatic cancer carcinogenesis that may be a potential drug target.
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