利用独立成分分析从动态PET提取心肌血流

A. Karpikov, H. Tagare, T. Mulnix, J. Gallezot, A. Sinusas, Chi Liu, R. Carson
{"title":"利用独立成分分析从动态PET提取心肌血流","authors":"A. Karpikov, H. Tagare, T. Mulnix, J. Gallezot, A. Sinusas, Chi Liu, R. Carson","doi":"10.1109/NSSMIC.2012.6551506","DOIUrl":null,"url":null,"abstract":"Generation of parametric images of myocardial blood flow (MBF) from dynamic PET requires a reproducible and reliable method to obtain left and right ventricular time-activity curves. We propose the use of Independent Component Analysis (ICA) on PET temporal information to segment the image data into three categories: right ventricle (RV), left ventricle (LV) and myocardium. ICA is an established signal processing technique that assumes that the dynamic signal in each voxel is a linear mixture of signals from statistically independent sources. The mixing process is due to cardiac motion and partial volume effects. Due to its ability to find the intensity of the underlying sources, ICA generates a 3D map of the mixing coefficients that allows the segmentation of structures. Dynamic cardiac PET data were acquired with a Siemens Biograph mCT PET/CT scanner using Rb-82 and [15O]water in nonhuman primate and pigs with injections of different activities. The Dice similarity coefficient (DSC) was used to compare the segmentations between scans of different species with different tracers. The LV and RV regions were used to calculate input functions for kinetic analysis and MBF estimation. Pairwise comparisons of the segmentations between different [15O]water PET scans gave DSC of 0.91 ± 0.09 and 0.92±0.08 for the RV and LV segmentations, respectively. For Rb-82 PET scans, the DSC values were of 0.89 ± 0.09 and 0.85±0.10 for RV and LV. We used contrast CT as a gold standard for the LV and RV segmentations. Pairwise comparisons of the segmentations between different contrast CT and Rb-82 PET scans gave DSC of 0.86 ± 0.09 and 0.85±0.09 for the RV and LV, respectively. Our work shows the reliability and reproducibility of the results of the segmentation algorithm. High quality parametric images of MBF and the kinetic parameters were obtained. These results suggest that ICA may be useful to extract time-activity curves for kinetic MBF analysis. The effects of partial volume on input TAC determination were also evaluated.","PeriodicalId":187728,"journal":{"name":"2012 IEEE Nuclear Science Symposium and Medical Imaging Conference Record (NSS/MIC)","volume":"84 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2012-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":"{\"title\":\"Myocardial blood flow from dynamic PET using Independent Component Analysis\",\"authors\":\"A. Karpikov, H. Tagare, T. Mulnix, J. Gallezot, A. Sinusas, Chi Liu, R. Carson\",\"doi\":\"10.1109/NSSMIC.2012.6551506\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Generation of parametric images of myocardial blood flow (MBF) from dynamic PET requires a reproducible and reliable method to obtain left and right ventricular time-activity curves. We propose the use of Independent Component Analysis (ICA) on PET temporal information to segment the image data into three categories: right ventricle (RV), left ventricle (LV) and myocardium. ICA is an established signal processing technique that assumes that the dynamic signal in each voxel is a linear mixture of signals from statistically independent sources. The mixing process is due to cardiac motion and partial volume effects. Due to its ability to find the intensity of the underlying sources, ICA generates a 3D map of the mixing coefficients that allows the segmentation of structures. Dynamic cardiac PET data were acquired with a Siemens Biograph mCT PET/CT scanner using Rb-82 and [15O]water in nonhuman primate and pigs with injections of different activities. The Dice similarity coefficient (DSC) was used to compare the segmentations between scans of different species with different tracers. The LV and RV regions were used to calculate input functions for kinetic analysis and MBF estimation. Pairwise comparisons of the segmentations between different [15O]water PET scans gave DSC of 0.91 ± 0.09 and 0.92±0.08 for the RV and LV segmentations, respectively. For Rb-82 PET scans, the DSC values were of 0.89 ± 0.09 and 0.85±0.10 for RV and LV. We used contrast CT as a gold standard for the LV and RV segmentations. Pairwise comparisons of the segmentations between different contrast CT and Rb-82 PET scans gave DSC of 0.86 ± 0.09 and 0.85±0.09 for the RV and LV, respectively. Our work shows the reliability and reproducibility of the results of the segmentation algorithm. High quality parametric images of MBF and the kinetic parameters were obtained. These results suggest that ICA may be useful to extract time-activity curves for kinetic MBF analysis. The effects of partial volume on input TAC determination were also evaluated.\",\"PeriodicalId\":187728,\"journal\":{\"name\":\"2012 IEEE Nuclear Science Symposium and Medical Imaging Conference Record (NSS/MIC)\",\"volume\":\"84 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2012-10-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2012 IEEE Nuclear Science Symposium and Medical Imaging Conference Record (NSS/MIC)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/NSSMIC.2012.6551506\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2012 IEEE Nuclear Science Symposium and Medical Imaging Conference Record (NSS/MIC)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/NSSMIC.2012.6551506","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 2

摘要

从动态PET中生成参数化心肌血流(MBF)图像需要一种可重复且可靠的方法来获得左、右心室时间-活动曲线。我们建议使用独立分量分析(ICA)对PET时间信息进行分割,将图像数据分为右心室(RV)、左心室(LV)和心肌三类。ICA是一种成熟的信号处理技术,它假设每个体素中的动态信号是来自统计独立源的信号的线性混合。混合过程是由于心脏运动和部分体积效应。由于ICA能够发现底层源的强度,它可以生成混合系数的3D图,从而可以对结构进行分割。使用西门子Biograph mCT PET/CT扫描仪,使用Rb-82和[15O]水,在注射不同活性的非人灵长类动物和猪中获得动态心脏PET数据。采用Dice相似系数(DSC)比较不同示踪剂对不同物种的扫描结果。LV和RV区域用于计算动力学分析和MBF估计的输入函数。对不同[15O]水PET扫描的分割结果进行两两比较,得出RV和LV分割的DSC分别为0.91±0.09和0.92±0.08。Rb-82 PET扫描,RV和LV的DSC值分别为0.89±0.09和0.85±0.10。我们使用对比CT作为左、右心室分割的金标准。对比不同对比CT和Rb-82 PET扫描的分割结果,右室和左室的DSC分别为0.86±0.09和0.85±0.09。我们的工作显示了分割算法结果的可靠性和可重复性。获得了高质量的MBF参数图像和动力学参数。这些结果表明,ICA可用于提取动力学MBF的时间-活度曲线。还评估了部分体积对输入TAC测定的影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Myocardial blood flow from dynamic PET using Independent Component Analysis
Generation of parametric images of myocardial blood flow (MBF) from dynamic PET requires a reproducible and reliable method to obtain left and right ventricular time-activity curves. We propose the use of Independent Component Analysis (ICA) on PET temporal information to segment the image data into three categories: right ventricle (RV), left ventricle (LV) and myocardium. ICA is an established signal processing technique that assumes that the dynamic signal in each voxel is a linear mixture of signals from statistically independent sources. The mixing process is due to cardiac motion and partial volume effects. Due to its ability to find the intensity of the underlying sources, ICA generates a 3D map of the mixing coefficients that allows the segmentation of structures. Dynamic cardiac PET data were acquired with a Siemens Biograph mCT PET/CT scanner using Rb-82 and [15O]water in nonhuman primate and pigs with injections of different activities. The Dice similarity coefficient (DSC) was used to compare the segmentations between scans of different species with different tracers. The LV and RV regions were used to calculate input functions for kinetic analysis and MBF estimation. Pairwise comparisons of the segmentations between different [15O]water PET scans gave DSC of 0.91 ± 0.09 and 0.92±0.08 for the RV and LV segmentations, respectively. For Rb-82 PET scans, the DSC values were of 0.89 ± 0.09 and 0.85±0.10 for RV and LV. We used contrast CT as a gold standard for the LV and RV segmentations. Pairwise comparisons of the segmentations between different contrast CT and Rb-82 PET scans gave DSC of 0.86 ± 0.09 and 0.85±0.09 for the RV and LV, respectively. Our work shows the reliability and reproducibility of the results of the segmentation algorithm. High quality parametric images of MBF and the kinetic parameters were obtained. These results suggest that ICA may be useful to extract time-activity curves for kinetic MBF analysis. The effects of partial volume on input TAC determination were also evaluated.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信