一种新的n7 -甲基鸟苷(M7g)甲基化相关Mirna标记在结肠癌患者中的预后价值

Chongyang Wang, Shouji Liu
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引用次数: 0

摘要

本研究选择M7G甲基化相关基因作为主要研究视角,建立一种新的M7G甲基化相关miRNA风险标志,对结肠癌住院患者的预后有价值。方法我们确定了两个与m7G甲基化相关的基因,并通过在PubMed数据库中搜索进行了验证。通过估算来自癌症基因组图谱(TCGA)数据库中457例结肠癌患者样本和8例匹配样本的mirna差异表达,筛选m7G甲基化相关mirna。选择单因素Cox分析和多因素Cox分析构建了12个m7G甲基化相关mirna的风险特征。采用nomogram来预测m7G甲基化相关mirna对发生、发展的潜在影响。通过功能富集分析对值得注意的deg进行了功能分类和分析。通过疾病本体分析,探索各种疾病与结肠癌的潜在联系。免疫细胞或免疫功能的相关分析结果揭示了免疫细胞或免疫功能在结肠癌发生发展中的作用。最后分析显著DEGs的高表达或低表达与免疫细胞和免疫功能的关系。结果nomogram分析结果表明,风险标志可以有效预测结肠癌患者的预后和总体累积生存概率(1-、3-、5年)。通过Kaplan-Meier曲线结果分析,我们可以得出结论,hsa-miR-21-3p的表达下调可能与患者生存期降低有显著关系。通过对基因本体论(GO)、京都基因与基因组百科全书(KEGG)和疾病本体论(DO)的分析,利用风险评分和免疫评分的共同deg,证明这些共同deg在肿瘤的发生和发展中发挥了部分作用。通过疾病本体论分析,我们发现饮食失调可能与结肠癌有关。结论M7G甲基化相关mirna与结肠癌患者的预后有关。根据我们的研究结果,m7G甲基化相关的miRNA调节因子可以作为可靠的结肠癌预后生物标志物,更有可能作为治疗策略的潜在靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A Novel N7-Methylguanosine (M7g) Methylation-Associated Mirna Signature for Prognostic Value in Patient with Carcinoma of Colon
Background M7G methylation-associated genes were selected as the main research perspectives in this study, establishing a novel m7G methylation-associated miRNA risk signature for prognostic value in-patient with carcinoma of colon. Methods We identified two genes that are m7G methylation-associated and have been validated by searching in the PubMed database. The m7G methylation-associated miRNAs were screened via estimating the differentially expressed of miRNAs in 457 carcinoma of colon patient samples and 8 matched samples from a database named The Cancer Genome Atlas (TCGA). Selecting Single-factor Cox analyses as well as multi-factor Cox analyses constructed the risk signature of 12 m7G methylation-associated miRNAs. Nomograms was adopted to predict the potential impact of m7G methylation-associated miRNAs on occurrence, development. The functions of DEGs that deserving to be noticed were classified and analyzed by functional enrichment analysis. Disease ontology analysis was used to explore the potential connection various diseases and carcinoma of colon. The outcome of associated analysis about immunocyte or immunological functioning revealed that what role does immunocyte or immunological functioning play in the development of carcinoma of colon. Finally, the relationship between high or low expression of significantly DEGs and immune cells and immune function was analyzed. Results The results of nomogram analysis were as follows that the risk signature might predict the prognosis and the overall cumulative probability of survival (1-,3-,5-year) effectively about patients with carcinoma of colon. Through the analysis of Kaplan-Meier curve outcomes, we can draw a conclusion that depressed expressed of hsa-miR-21-3p might be significantly relevant with decreased survival of patients. What the analyses of Gene ontology (GO) , Kyoto Encyclopedia of Genes and Genomes (KEGG) and Disease ontology(DO),taking advantage of the common DEGs about risk score and immune score, demonstrated that these common DEGs play a partial role in the occurrence and development of tumors. Through disease ontology analysis, we found that eating disorder might be associated with carcinoma of colon. Conclusions M7G methylation-associated miRNAs were related to the prognosis of patients with carcinoma of colon. A risk signature established based on these miRNAs could effectively predict the survival rate of later period in patients with carcinoma of colon .According to the displayed outcome from Our research that m7G methylation-associated miRNA regulators can serve as reliable prognostic biomarkers of carcinoma of colon, which might Greater probably be applied as potential targets of therapeutic strategies.
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