阿根廷南部科尔多瓦地区291个cimmyt玉米品系的基因型多样性及表型特征

Ezequiel A. Rossi, M. Ruíz, M. A. D. Renzo, N. Bonamico
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引用次数: 1

摘要

CIMMYT玉米自交系(cml)免费分发给世界各地的育种计划。更好的表型和基因型多样性信息可以指导育种者如何在育种计划中更有效地利用cml。本研究对291份CIMMYT玉米自交系在阿根廷Córdoba南部进行了9个农业形态性状的表型分析,并利用18082个snp进行了基因分型。基于地理信息和环境适应性,将291种cml划分为8个亚群。花丝间隔(IAE)是表型多样性较高的性状。40%的玉米自交系,IAE少于5天,表现出对阿根廷Córdoba南部生长条件的良好适应。环境适应亚群解释的低表型变异表明,在该小组中,种群结构只是影响表型多样性的一个次要因素。主成分分析(ACP)允许我们获得表型和基因型排序。广义procrustes分析(APG)表明,两种数据类型在玉米品系总面板上的一致性为60%。在各环境适应亚组中,APG共识度较高。这一结果可能表明snp标记与控制这些农业形态性状的基因之间存在连锁不平衡,有望作为鉴定数量性状位点(Quantitative Trait Loci, QTL)的初步工具。当地环境中遗传多样性、群体结构和表型多样性的信息将有助于玉米育种者更好地了解如何使用当前CIMMYT玉米自交系群。关键词:广义遗传力,多变量分析,snp,农业形态性状
本文章由计算机程序翻译,如有差异,请以英文原文为准。
GENOTYPIC DIVERSITY IN 291 MAIZE LINES FROM CIMMYT AND PHENOTYPIC CHARACTERIZATION IN SOUTHERN CORDOBA, ARGENTINA
CIMMYT maize inbred lines (CMLs) are freely distributed to breeding programs around the world. Better information on phenotypic and genotypic diversity may provide guidance to breeders on how to use more efficiently the CMLs in their breeding programs. In this study a group of 291 CIMMYT maize inbred lines, was phenotyped by nine agro-morphological traits in south Córdoba, Argentina and genotyped using 18,082 SNPs. Based on the geographic information and the environmental adaptation, 291 CMLs were classified into eight subgroups. Anthesis-silking interval (IAE) was the trait with higher phenotypic diversity. A 40% of maize inbred lines, with IAE less than five days, show a good adaptation to growing conditions in south Córdoba, Argentina. The low phenotypic variation explained by environmental adaptation subgroups indicates that population structure is only a minor factor contributing to phenotypic diversity in this panel. Principal component analysis (ACP) allowed us to obtain phenotypic and genotypic orderings. Generalized procrustes analysis (APG) indicated a 60% consensus between both data type from the total panel of maize lines. In each environmental adaptation subgroup, the APG consensus was higher. This result, which might indicate linkage disequilibrium between SNPs markers and the genes controlling these agro-morphological traits, is promising and could be used as an initial tool in the identification of Quantitative Trait Loci (QTL). Information on genetic diversity, population structure and phenotypic diversity in local environments will help maize breeders to better understand how to use the current CIMMYT maize inbred lines group. Key words: broad-sense heritability, multivariate analysis, SNPs, agro-morphological traits.
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