在计算机上验证了摩尔多瓦共和国陆生脊椎动物物种的元条形码引物

Victor Sîtnic
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引用次数: 0

摘要

在本研究中,我们旨在设计并进行新的引物的硅测试,这些引物可用于摩尔多瓦共和国陆生脊椎动物物种的元条形码研究。利用生物信息学技术,对新引物的分类覆盖、特异性和保护程度进行了比较,并与脊椎动物元条形码的通用引物进行了比较。目标群体包括174种陆生脊椎动物,它们是摩尔多瓦动物群的一部分,其有丝分裂基因组已被纳入全球RefSeq数据库。在这组物种的框架中,新的候选引物表现出优越的性能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
In Silico validated primers for metabarcoding terrestrial vertebrate species from the Republic of Moldova
In the present study, we aimed to design and perform in silico testing of new primers that could be used for metabarcoding research of terrestrial vertebrates species from the Republic of Moldova. Using bioinformatics techniques, were determined the taxonomic coverage, specificity and degree of conservation of new primers in comparison to universal primers used for vertebrate metabarcoding. The target group consisted of 174 terrestrial vertebrate species that are part of Moldova's fauna and whose mitogenomes are included in the global RefSeq database. In the frame of this group of species the new candidate primers demonstrated a superior performance.
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