皮肤美容与激光治疗杂志

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引用次数: 0

摘要

背景:铜增生是最近发现的一种铜诱导细胞死亡的方法,在胃腺癌(STAD)的进展和扩散中起重要作用。多项研究发现,lncrna或长链非编码rna与STAD患者的预后密切相关。然而,STAD中cuprotosis与lncrna之间的联系的本质仍未完全了解。我们的研究旨在基于与铜骨畸形相关的lncrna创建STAD的预测标志,希望这将允许更准确地预测STAD的结果。方法:我们从癌症基因组图谱(TCGA)中检索STAD的转录谱和临床信息。铜裂相关基因(CRGs)是通过最高水平的原始研究收集的,并与现有文献的信息进行了补充。我们使用共表达网络分析、Cox回归分析和最小绝对收缩和选择算子(LASSO)分析构建了风险模型,以识别与铜增生相关的lncrna,然后在验证集中验证其性能。采用生存研究、无进展生存分析(PFS)、受试者工作特征(ROC)曲线分析、Cox回归分析、形态图分析、临床病理特征相关分析和主成分分析来评价该特征的预后效用。此外,ssGSEA算法、KEGG和GO被用于评估生物功能。采用肿瘤突变负荷(TMB)和肿瘤免疫功能障碍和排斥反应(TIDE)评分来评估免疫治疗的有效性。结果:为构建预测模型,共鉴定出9个不同的lncrna (AC087521.1、AP003498.2、AC069234.5、LINC01094、AC019080.1、BX890604.1、AC005041.3、DPP4-DT、AL356489.2、AL139147.1)。将Kaplan-Meier曲线和ROC曲线应用于TCGA的训练集和测试集,证明该特征包含足够的预测潜力。正如Cox回归和分层生存分析的结果所证明的那样,该特征包含独立于其他临床变量的风险指标。ssGSEA研究提供了额外的证据,表明预测变量与STAD患者的免疫状况高度相关。令人惊讶的是,高风险和高TMB的结合减少了患者的生存时间。高危组患者的TIDE评分较高,这也表明免疫检查点阻断反应的预后较差。结论:10个铜裂相关lncrna风险谱的潜在临床应用包括评估STAD患者的预后和分子谱,以及创建更有针对性的治疗策略。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Dermatology Journal of Cosmetic and Laser Therapy
Background: Cuproptosis is a recently discovered method of copper-induced cell death that serves an essential part in the progression and spread of stomach adenocarcinoma (STAD). Multiple studies have found that lncRNAs, or long non-coding RNAs, are strongly correlated with the outcome for STAD patients. However, the nature of the connection between cuproptosis and lncRNAs in STAD is still not completely understood. Our study set out to create a predictive hallmark of STAD based on lncRNAs associated with cuproptosis, with the hope that this would allow for more accurate prediction of STAD outcomes. Methods: We retrieved the transcriptional profile of STAD as well as clinical information from The Cancer Genome Atlas (TCGA). The cuproptosis-related genes (CRGs) were gathered through the highest level of original research and complemented with information from the available literature. We constructed a risk model using co-expression network analysis, Cox regression analysis, and least absolute shrinkage and selection operator (LASSO) analysis to identify lncRNAs associated with cuproptosis, and then validated its performance in a validation set. Survival study, progression-free survival analysis (PFS), receiver operating characteristic (ROC) curve analysis, Cox regression analysis, nomograms, clinicopathological characteristic correlation analysis, and principal components analysis were used to evaluate the signature's prognostic utility. Additionally, ssGSEA algorithms, KEGG, and GO were employed to assess biological functions. The tumor mutational burden (TMB) and tumor immune dysfunction and rejection (TIDE) scores were utilized in order to evaluate the effectiveness of the immunotherapy. Results: In order to construct predictive models, nine distinct lncRNAs (AC087521.1, AP003498.2, AC069234.5, LINC01094, AC019080.1, BX890604.1, AC005041.3, DPP4-DT, AL356489.2, AL139147.1) were identified. The Kaplan-Meier and ROC curves, which were applied to both the training and testing sets of the TCGA, provided evidence that the signature contained a sufficient amount of predictive potential. The signature was shown to contain risk indicators that were independent of the other clinical variables, as demonstrated by the findings of a Cox regression and a stratified survival analysis. The ssGSEA study provided additional evidence that predictive variables were highly connected with the immunological condition of STAD patients. Surprisingly, the combination of high risk and high TMB reduced survival time for patients. A worse prognosis for the immune checkpoint blockade response was also suggested by the fact that patients in the high-risk group had higher TIDE scores. Conclusion: The potential clinical uses of the identified risk profiles for the 10 cuproptosis-related lncRNAs include the assessment of the prognosis and molecular profile of STAD patients and the creation of more targeted therapy strategies.
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