罗勒复方抗SARS-CoV2 RdRp药物的计算机辅助药物设计

M. Shafiq, R. Saif, L. Ali, T. Ahmad, A. Sohail
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摘要

由于SARS-CoV2引起的COVID-19大流行,世界的主流形势具有挑战性。为了通过降低疾病严重程度和感染来应对这一新出现的大流行,需要一小时的时间来开发有效的疫苗和抗病毒候选药物,作为针对SARS-CoV2的治疗剂。本研究旨在鉴定罗勒对SARS-CoV2 RdRp的潜在抗病毒药物。根据最佳对接分数,从57个罗勒香化合物中筛选出内树苷、熊果酸、β-倍半黄酮、芹菜素、神经樟醇、乙酸壬酯和乙酸香叶苷。并将对接结果与临床已使用的抗SARS-CoV2 RdRp药物(Remdesivir和利巴韦林)进行比较。采用MOE软件进行分子对接。使用admetSAR、pkCSM和SwissADME对所有筛选的化合物进行ADMET分析和药物可能性分析。总的来说,筛选的化合物的最佳结合能表明它们具有开发抗SARS-CoV2药物的潜力。内华达蛋白对SARS-CoV2的RdRp具有良好的对接评分和高的结合亲和力。因此,它可能代表着抑制COVID-19的潜力。因此,罗勒营养保健品可能是治疗和预防COVID-19的有效候选药物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Computer-Aided Drug Designing of Ocimum Basilicum Compounds as Therapeutic Agents Against RdRp of SARS-CoV2
The prevailing situation of the world is challenging due to COVID-19 pandemic that is caused by SARS-CoV2. To combat with this emerging pandemic by reducing disease severity and infection, the need of hour is to develop an effective vaccine and antiviral candidates as therapeutic agents against SARS-CoV2. This study was developed for the identification of potential anti-viral agents, from Ocimum basilicum against RdRp of SARS-CoV2. In this concern, nevadensin, ursolic acid, β-Sesquiphellandren, apigenin, nerolidol, nonyl acetate and geranyl acetate were screened out of fifty-seven compounds from Ocimum basilicum based on their best docking scores. The docking results were also compared with already clinically used drugs (Remdesivir and Ribavirin) against RdRp of SARS-CoV2. Molecular docking was performed using MOE software. The ADMET analysis and drug likeliness were also performed for all screened compounds by using admetSAR, pkCSM and SwissADME. Cumulatively, the optimum binding energies of screened compounds indicated their potential for drug development against SARS-CoV2. It appears promising that nevadensin exhibited a good docking score and high binding affinity towards RdRp of SARS-CoV2. Therefore, it may represent the potential to inhibit COVID-19. Hence, Ocimum basilicum nutraceuticals could be effective therapeutic candidates for the treatment and prevention of COVID-19.
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