用粗粒度分子动力学研究温度和压力对双棕榈酰磷脂酰胆碱自组装的影响

N. Shaari, R. A. Karjiban, M. Basri
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引用次数: 1

摘要

粗粒度分子动力学(CG-MD)技术是一种很有前途的工具,可以超越原子分子动力学(MD)来探索真实物理系统的时间和长度尺度。本文采用粗粒度分子动力学(CG-MD)模拟方法研究了64个双棕榈酰磷脂酰胆碱(DPPC)分子在水中的双分子层的结构和动力学性质。研究了温度和压力对DPPC自组装的影响。所制备的模型分别在298K和323K的各向同性和半各向同性压力下进行了模拟。在500ns的时间内,所有模型系统从随机构型开始聚集,然后形成双层结构。每个模型的每脂面积、厚度和径向分布值不同,但双层形成模式相同。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The effect of temperature and pressure on the self-assembly of dipalmitoylphosphatidylcholine using coarse-grained molecular dynamics
The use of coarse-grained molecular dynamics (CG-MD) technique is a promising tool to explore the time and length scales of real physical system beyond what is feasible with atomistic molecular dynamics (MD). Here, structural and dynamics properties of the bilayer comprising 64 molecules of dipalmitoylphosphatidylcholine (DPPC) in water were investigated using coarse-grained molecular dynamics (CG-MD) simulation method. This was done to explore the effect of temperature and pressure on the self-assembly of DPPC. The models prepared were simulated at the temperatures of 298K and 323K under isotropic and semi-isotropic pressures. The aggregation started from the random configurations followed by forming bilayers in the period of 500 ns for all model systems. Area per lipid, thickness, and radial distribution values were different for each model while the bilayer formation pattern was the same. 
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