根据CeRNA网络分析,LncRNA LINC00665通过Mir-9-5p影响胃癌

Dayuan Chen, Fan Chen, P. Guo, Hongbo Chen
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摘要

胃癌(GC)是世界上最常见的癌症之一。虽然近几十年来全球胃癌的发病率和死亡率有所下降,但其预后仍然较差。此外,对气相色谱的确切机理还没有深入的研究。本研究旨在确定胃癌预后预测的中心基因,构建由信使RNA (mRNA)、微RNA (miRNA)和长链非编码RNA (lncRNA)组成的调控网络。利用GEO数据库中的信息发现了6个基因(COL10A1、CTHRC1、FAP、FNDC1、INHBA和SULF1)。这些基因的表达在胃癌患者和非肿瘤组之间存在差异,这种差异可能会影响胃癌患者的生存率。构建由mRNA (CTHRC1、FNDC1和INHBA)、miRNA (mir-9-5p)和lncRNA (LINC00665)组成的ceRNA网络,反向预测与胃癌预后相关的靶基因。根据ceRNA理论,LINC00665可以与mir-9-5p竞争结合,增加mir-9-5p调控的CTHRC1、FNDC1和INHBA的转录。然而,本研究有许多局限性。首先,在检查差异表达基因时,没有考虑年龄、性别、肿瘤分期、患者分类等因素。其次,仅显示FNDC1在mRNA中的表达。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
LncRNA LINC00665 affected gastric cancer through Mir-9-5p according to CeRNA network analysis
Gastric cancer (GC) is one of the most common cancers in the world. Although the incidence and mortality rates of GC have declined globally in the past decades, its prognosis is still poor. Moreover, the exact mechanism of GC has not been thoroughly studied. This study aimed to identify central genes to improve the prognostic prediction of GC and construct a regulatory network of messenger RNA (mRNA), microRNA (miRNA), and long noncoding RNA (lncRNA). Six genes (COL10A1, CTHRC1, FAP, FNDC1, INHBA, and SULF1) were found using the information in the GEO database. The expression of these genes differs between patients with GC and nontumor groups, and such difference may affect the survival rate of patients with GC. A ceRNA network consisting of mRNA (CTHRC1, FNDC1, and INHBA), miRNA (mir-9-5p), and lncRNA (LINC00665) was constructed to reverse predict the target genes related to GC prognosis. According to the ceRNA theory, LINC00665 could bind with mir-9-5p in a competitive manner, increasing the transcription of CTHRC1, FNDC1, and INHBA regulated by mir-9-5p. However, this study has many limitations. First, age, sex, tumor stage, patient classification, and other factors were not considered when examining differentially expressed genes. Second, only FNDC1 expression in mRNA was shown.
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