果蝇胚胎图像中基因表达区的定位

Qi Li, Wagner Silveira, Y. Gong
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引用次数: 0

摘要

果蝇胚胎图像中基因表达区域的自动定位是发现基因-基因相互作用模式的计算系统的重要步骤。在本文中,我们提出了一个阈值框架,该框架通过多个响应函数(包括强度直方图)提供的良好候选阈值的一致性标准来选择最佳阈值。在实验中,我们在伯克利果蝇基因组计划(BDGP)数据集的图像上对所提出的框架进行了测试,并与四种已知方法进行了比较,获得了令人满意的结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Localization of gene expression regions in Drosophila embryonic images
Automatic localization of gene expression regions in Drosophila embryonic images is an important step in a computational system for the discovery of patterns of gene-gene interaction. In this paper, we propose a thresholding framework that selects an optimal threshold via a consistency criterion on good candidate thresholds provided by multiple response functions, including intensity histograms. In experiments, we test the proposed framework, being compared with four well-known methods, on images in Berkley Drosophila Genome Project (BDGP) dataset, and obtain promising results.
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