在生化回路中,绝缘基序抑制反作用并不需要高的燃料消耗率

Abhishek Deshpande, Thomas E. Ouldridge
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引用次数: 6

摘要

当分子网络与下游网络的耦合导致信号从到反向传播时,就会产生追溯性。这种现象代表了生化电路模块化的崩溃,阻碍了复杂功能网络的合理设计。考虑到信号转导结构的简单模型,作者证明了回溯性对上游系统特性的强烈依赖,并探索了可以减轻回溯效应的燃料消耗绝缘基序的成本和功效。他们发现,简单的绝缘基序可以通过与上游系统的弱耦合来以低燃料成本抑制回溯性。然而,这种设计方法降低了信号网络对泄漏反应扰动的鲁棒性,并可能损害其对快速变化信号的响应能力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

High rates of fuel consumption are not required by insulating motifs to suppress retroactivity in biochemical circuits

High rates of fuel consumption are not required by insulating motifs to suppress retroactivity in biochemical circuits

Retroactivity arises when the coupling of a molecular network to a downstream network results in signal propagation back from to . The phenomenon represents a breakdown in modularity of biochemical circuits and hampers the rational design of complex functional networks. Considering simple models of signal-transduction architectures, the authors demonstrate the strong dependence of retroactivity on the properties of the upstream system, and explore the cost and efficacy of fuel-consuming insulating motifs that can mitigate retroactive effects. They find that simple insulating motifs can suppress retroactivity at a low fuel cost by coupling only weakly to the upstream system . However, this design approach reduces the signalling network's robustness to perturbations from leak reactions, and potentially compromises its ability to respond to rapidly varying signals.

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