亚洲柑橘木虱几丁质酶家族基因的手工整理和系统发育分析。

GigaByte (Hong Kong, China) Pub Date : 2022-03-17 eCollection Date: 2022-01-01 DOI:10.46471/gigabyte.46
Teresa D Shippy, Sherry Miller, Blessy Tamayo, Prashant S Hosmani, Mirella Flores-Gonzalez, Lukas A Mueller, Wayne B Hunter, Susan J Brown, Tom D'Elia, Surya Saha
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引用次数: 0

摘要

几丁质酶是一种消化多糖聚合物几丁质的酶。在昆虫发育过程中,甲壳素的分解是外骨骼蜕皮的重要步骤。敲除蜕皮所需的几丁质酶对昆虫是致命的,因此几丁质酶基因成为基于 RNAi 的害虫控制方法的一个有趣靶标。亚洲柑橘木虱(Diaphorina citri)携带导致黄龙病或柑橘绿化病的细菌,这是一种毁灭性的柑橘病害。我们鉴定并注释了来自 D. citri 的 12 个几丁质酶家族基因,作为创建高质量基因模型以帮助设计害虫控制抑制分子的社区努力的一部分。我们根据既定的分类方案对柠檬蝇甲壳素酶进行了分类,并重新评估了其他半翅目昆虫甲壳素酶的分类。除了已知类别的几丁质酶外,我们还发现了一种存在于 D. citri 和几种相关半翅目昆虫中的新型几丁质酶,这种几丁质酶似乎是水平基因转移的结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Manual curation and phylogenetic analysis of chitinase family genes in the Asian citrus psyllid, <i>Diaphorina citri</i>.

Manual curation and phylogenetic analysis of chitinase family genes in the Asian citrus psyllid, <i>Diaphorina citri</i>.

Manual curation and phylogenetic analysis of chitinase family genes in the Asian citrus psyllid, <i>Diaphorina citri</i>.

Manual curation and phylogenetic analysis of chitinase family genes in the Asian citrus psyllid, Diaphorina citri.

Chitinases are enzymes that digest the polysaccharide polymer chitin. During insect development, breakdown of chitin is an essential step in molting of the exoskeleton. Knockdown of chitinases required for molting is lethal to insects, making chitinase genes an interesting target for RNAi-based pest control methods. The Asian citrus psyllid, Diaphorina citri, carries the bacterium causing Huanglongbing, or citrus greening disease, a devastating citrus disease. We identified and annotated 12 chitinase family genes from D. citri as part of a community effort to create high-quality gene models to aid the design of interdictory molecules for pest control. We categorized the D. citri chitinases according to an established classification scheme and re-evaluated the classification of chitinases in other hemipterans. In addition to chitinases from known groups, we identified a novel class of chitinases present in D. citri and several related hemipterans that appears to be the result of horizontal gene transfer.

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