Pavel Švec , Hans-Jürgen Busse , Karel Sedlář , Jana Musilová , Stanislava Králová , Eva Staňková , Ondrej Šedo , Daniel Krsek , Vendula Koublová , Lucie Krištofová , Ivo Sedláček
{"title":"南极棒状杆菌(Corynebacterium antarcticum sp.nov.)、马拉姆宾塞棒状杆菌(Colynebact杆菌marambiense sp.nov..)、子午线棒状杆菌(corynebacturium meridianum sp.nov.)和Pygoscelis sp.nov.nov.,分离自阿德利企鹅(Pygoscelisadeliae)。","authors":"Pavel Švec , Hans-Jürgen Busse , Karel Sedlář , Jana Musilová , Stanislava Králová , Eva Staňková , Ondrej Šedo , Daniel Krsek , Vendula Koublová , Lucie Krištofová , Ivo Sedláček","doi":"10.1016/j.syapm.2022.126390","DOIUrl":null,"url":null,"abstract":"<div><p><span>A taxonomic study was conducted on 16 bacterial strains isolated from wild Adélie penguins (</span><span><em>Pygoscelis adeliae</em></span><span>) from Seymour (Marambio) Island and James Ross Island. An initial screening by repetitive sequence-based PCR fingerprinting divided the strains studied into four coherent groups. Phylogenetic analysis based on 16S rRNA gene sequences assigned all groups to the genus </span><span><em>Corynebacterium</em></span> and showed that <em>Corynebacterium glyciniphilum</em> and <em>Corynebacterium terpenotabidum</em><span> were the closest species with 16S rRNA gene sequence similarities between 95.4 % and 96.5 %. Further examination of the strains studied with ribotyping<span>, MALDI-TOF mass spectrometry, comprehensive biotyping and calculation of average nucleotide identity and digital DNA–DNA hybridisation values confirmed the separation of the four groups from each other and from the other </span></span><em>Corynebacterium</em> species. Chemotaxonomically, the four strains P5828<sup>T</sup>, P5850<sup>T</sup>, P6136<sup>T</sup>, P7210<sup>T</sup> representing the studied groups were characterised by C<sub>16:0</sub> and C<sub>18:1</sub> <em>ω9c</em> as the major fatty acids, by the presence of <em>meso</em><span>-diaminopimelic acid in the peptidoglycan<span>, the presence of corynemycolic acids and a quinone<span> system with the predominant menaquinone MK-9(H</span></span></span><sub>2</sub>). The results of this study show that the strains studied represent four new species of the genus <em>Corynebacterium</em>, for which the names <span><em>Corynebacterium </em><em>antarcticum</em></span> sp. nov. (type strain P5850<sup>T</sup> = CCM 8835<sup>T</sup> = LMG 30620<sup>T</sup>), <em>Corynebacterium marambiense</em> sp. nov. (type strain P5828<sup>T</sup> = CCM 8864<sup>T</sup> = LMG 31626<sup>T</sup>), <em>Corynebacterium meridianum</em> sp. nov<strong>.</strong> (type strain P6136<sup>T</sup> = CCM 8863<sup>T</sup> = LMG 31628<sup>T</sup>) and <em>Corynebacterium pygosceleis</em> sp. nov. (type strain P7210<sup>T</sup> = CCM 8836<sup>T</sup> = LMG 30621<sup>T</sup>) are proposed.</p></div>","PeriodicalId":3,"journal":{"name":"ACS Applied Electronic Materials","volume":null,"pages":null},"PeriodicalIF":4.3000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Corynebacterium antarcticum sp. nov., Corynebacterium marambiense sp. nov., Corynebacterium meridianum sp. nov., and Corynebacterium pygosceleis sp. nov., isolated from Adélie penguins (Pygoscelis adeliae)\",\"authors\":\"Pavel Švec , Hans-Jürgen Busse , Karel Sedlář , Jana Musilová , Stanislava Králová , Eva Staňková , Ondrej Šedo , Daniel Krsek , Vendula Koublová , Lucie Krištofová , Ivo Sedláček\",\"doi\":\"10.1016/j.syapm.2022.126390\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p><span>A taxonomic study was conducted on 16 bacterial strains isolated from wild Adélie penguins (</span><span><em>Pygoscelis adeliae</em></span><span>) from Seymour (Marambio) Island and James Ross Island. An initial screening by repetitive sequence-based PCR fingerprinting divided the strains studied into four coherent groups. Phylogenetic analysis based on 16S rRNA gene sequences assigned all groups to the genus </span><span><em>Corynebacterium</em></span> and showed that <em>Corynebacterium glyciniphilum</em> and <em>Corynebacterium terpenotabidum</em><span> were the closest species with 16S rRNA gene sequence similarities between 95.4 % and 96.5 %. Further examination of the strains studied with ribotyping<span>, MALDI-TOF mass spectrometry, comprehensive biotyping and calculation of average nucleotide identity and digital DNA–DNA hybridisation values confirmed the separation of the four groups from each other and from the other </span></span><em>Corynebacterium</em> species. Chemotaxonomically, the four strains P5828<sup>T</sup>, P5850<sup>T</sup>, P6136<sup>T</sup>, P7210<sup>T</sup> representing the studied groups were characterised by C<sub>16:0</sub> and C<sub>18:1</sub> <em>ω9c</em> as the major fatty acids, by the presence of <em>meso</em><span>-diaminopimelic acid in the peptidoglycan<span>, the presence of corynemycolic acids and a quinone<span> system with the predominant menaquinone MK-9(H</span></span></span><sub>2</sub>). The results of this study show that the strains studied represent four new species of the genus <em>Corynebacterium</em>, for which the names <span><em>Corynebacterium </em><em>antarcticum</em></span> sp. nov. (type strain P5850<sup>T</sup> = CCM 8835<sup>T</sup> = LMG 30620<sup>T</sup>), <em>Corynebacterium marambiense</em> sp. nov. (type strain P5828<sup>T</sup> = CCM 8864<sup>T</sup> = LMG 31626<sup>T</sup>), <em>Corynebacterium meridianum</em> sp. nov<strong>.</strong> (type strain P6136<sup>T</sup> = CCM 8863<sup>T</sup> = LMG 31628<sup>T</sup>) and <em>Corynebacterium pygosceleis</em> sp. nov. (type strain P7210<sup>T</sup> = CCM 8836<sup>T</sup> = LMG 30621<sup>T</sup>) are proposed.</p></div>\",\"PeriodicalId\":3,\"journal\":{\"name\":\"ACS Applied Electronic Materials\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.3000,\"publicationDate\":\"2023-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Applied Electronic Materials\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0723202022000972\",\"RegionNum\":3,\"RegionCategory\":\"材料科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENGINEERING, ELECTRICAL & ELECTRONIC\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Applied Electronic Materials","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0723202022000972","RegionNum":3,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
A taxonomic study was conducted on 16 bacterial strains isolated from wild Adélie penguins (Pygoscelis adeliae) from Seymour (Marambio) Island and James Ross Island. An initial screening by repetitive sequence-based PCR fingerprinting divided the strains studied into four coherent groups. Phylogenetic analysis based on 16S rRNA gene sequences assigned all groups to the genus Corynebacterium and showed that Corynebacterium glyciniphilum and Corynebacterium terpenotabidum were the closest species with 16S rRNA gene sequence similarities between 95.4 % and 96.5 %. Further examination of the strains studied with ribotyping, MALDI-TOF mass spectrometry, comprehensive biotyping and calculation of average nucleotide identity and digital DNA–DNA hybridisation values confirmed the separation of the four groups from each other and from the other Corynebacterium species. Chemotaxonomically, the four strains P5828T, P5850T, P6136T, P7210T representing the studied groups were characterised by C16:0 and C18:1ω9c as the major fatty acids, by the presence of meso-diaminopimelic acid in the peptidoglycan, the presence of corynemycolic acids and a quinone system with the predominant menaquinone MK-9(H2). The results of this study show that the strains studied represent four new species of the genus Corynebacterium, for which the names Corynebacterium antarcticum sp. nov. (type strain P5850T = CCM 8835T = LMG 30620T), Corynebacterium marambiense sp. nov. (type strain P5828T = CCM 8864T = LMG 31626T), Corynebacterium meridianum sp. nov. (type strain P6136T = CCM 8863T = LMG 31628T) and Corynebacterium pygosceleis sp. nov. (type strain P7210T = CCM 8836T = LMG 30621T) are proposed.