miR-193b-3p/CDK1信号在HCC增殖和迁移中的新作用:基于生物信息学分析和实验研究

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Xue Pang, Wei Wan, Xingxing Wu, Yu Shen
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引用次数: 1

摘要

肝细胞癌(HCC)是一种常见的人类恶性肿瘤,死亡率高,预后差。使用微阵列高通量筛选平台已经检测到越来越多的HCC病理生理基础的新靶点。本研究进行了生物信息学分析,以探索HCC的潜在生物标志物,并评估miR-193b-3p/CDK1信号通路在HCC进展中的潜在作用。共从GSE33294、GSE104310和GSE144269中筛选出241个共同差异表达基因(deg)。功能分析结果表明,deg与“细胞周期”、“细胞分裂”和“增殖”显著相关。蛋白相互作用网络分析从常见DEGs中提取了10个枢纽基因。10个枢纽基因在HCC组织中显著过表达。Kaplan-Meier生存分析显示10个枢纽基因与HCC患者较差的预后相关。功能分析显示,CDK1敲低抑制了HCC细胞的增殖和迁移。荧光素酶报告基因检测显示,miR-193b-3p可以靶向CDK1 3'非翻译区,miR-193b-3p负向调节CDK1。强制CDK1表达减弱了mir -193b-3p调节的对HCC细胞增殖和迁移的抑制作用。总之,我们进行了全面的生物信息学分析,并确定了10个与HCC患者预后相关的中心基因。功能分析显示,受miR-193b-3p负调控的CDK1可能作为癌基因促进HCC细胞增殖和迁移,并可能预测HCC患者预后不良。然而,CDK1/miR-193b-3p的作用可能仍需要进一步研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

The Novel Action of miR-193b-3p/CDK1 Signaling in HCC Proliferation and Migration: A Study Based on Bioinformatic Analysis and Experimental Investigation.

The Novel Action of miR-193b-3p/CDK1 Signaling in HCC Proliferation and Migration: A Study Based on Bioinformatic Analysis and Experimental Investigation.

The Novel Action of miR-193b-3p/CDK1 Signaling in HCC Proliferation and Migration: A Study Based on Bioinformatic Analysis and Experimental Investigation.

The Novel Action of miR-193b-3p/CDK1 Signaling in HCC Proliferation and Migration: A Study Based on Bioinformatic Analysis and Experimental Investigation.

Hepatocellular carcinoma (HCC) is a common human malignancy with high mortality and dismal prognosis. A growing number of novel targets underlying HCC pathophysiology have been detected using microarray high throughput screening platforms. This study carried out bioinformatics analysis to explore underlying biomarkers in HCC and assessed the potential action of the miR-193b-3p/CDK1 signaling pathway in HCC progression. A total of 241 common differentially expressed genes (DEGs) were screened from GSE33294, GSE104310, and GSE144269. Functional analysis results implicated that DEGs are significantly associated with "cell cycle," "cell division," and "proliferation." The protein-protein interaction network analysis extracted ten hub genes from common DEGs. Ten hub genes were significantly overexpression in HCC tissues. Kaplan-Meier survival analysis revealed that 10 hub genes were linked with a poorer prognosis in HCC patients. Functional assays showed that CDK1 knockdown repressed HCC cell proliferation and migration. Luciferase reporter assay showed that miR-193b-3p could target CDK1 3' untranslated region, and miR-193b-3p negatively modulated CDK1. Enforced CDK1 expression attenuated miR-193b-3p-modulated suppressive actions on HCC cell proliferation and migration. To summarize, we performed a comprehensive bioinformatics analysis and identified 10 hub genes linked to the prognosis in HCC patients. Functional analysis revealed that CDK1, negatively regulated by miR-193b-3p, may act as an oncogene to promote HCC cell proliferation and migration and may predict poor prognosis of HCC patients. However, the role of CDK1/miR-193b-3p may still require further investigation.

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来源期刊
International Journal of Genomics
International Journal of Genomics BIOCHEMISTRY & MOLECULAR BIOLOGY-BIOTECHNOLOGY & APPLIED MICROBIOLOGY
CiteScore
5.40
自引率
0.00%
发文量
33
审稿时长
17 weeks
期刊介绍: International Journal of Genomics is a peer-reviewed, Open Access journal that publishes research articles as well as review articles in all areas of genome-scale analysis. Topics covered by the journal include, but are not limited to: bioinformatics, clinical genomics, disease genomics, epigenomics, evolutionary genomics, functional genomics, genome engineering, and synthetic genomics.
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