修正的小波分析法可量化昼夜节律和超昼夜节律之间的动态交互作用。

IF 2.9 3区 生物学 Q2 BIOLOGY
Journal of Biological Rhythms Pub Date : 2022-12-01 Epub Date: 2022-11-15 DOI:10.1177/07487304221128652
Jonathan P Riggle, Leslie M Kay, Kenneth G Onishi, David T Falk, Benjamin L Smarr, Irving Zucker, Brian J Prendergast
{"title":"修正的小波分析法可量化昼夜节律和超昼夜节律之间的动态交互作用。","authors":"Jonathan P Riggle, Leslie M Kay, Kenneth G Onishi, David T Falk, Benjamin L Smarr, Irving Zucker, Brian J Prendergast","doi":"10.1177/07487304221128652","DOIUrl":null,"url":null,"abstract":"<p><p>Circadian rhythms provide daily temporal structure to cellular and organismal biological processes, ranging from gene expression to cognition. Higher-frequency (intradaily) ultradian rhythms are similarly ubiquitous but have garnered far less empirical study, in part because of the properties that define them-multimodal periods, non-stationarity, circadian harmonics, and diurnal modulation-pose challenges to their accurate and precise quantification. Wavelet analyses are ideally suited to address these challenges, but wavelet-based measurement of ultradian rhythms has remained largely idiographic. Here, we describe novel analytical approaches, based on discrete and continuous wavelet transforms, which permit quantification of rhythmic power distribution across a broad ultradian spectrum, as well as precise identification of period within empirically determined ultradian bands. Moreover, the aggregation of normalized wavelet matrices allows group-level analyses of experimental treatments, thereby circumventing limitations of idiographic approaches. The accuracy and precision of these wavelet analyses were validated using <i>in silico</i> and <i>in vivo</i> models with known ultradian features. Experiments in male and female mice yielded robust and repeatable measures of ultradian period and power in home cage locomotor activity, confirming and extending reports of ultradian rhythm modulation by sex, gonadal hormones, and circadian entrainment. Seasonal changes in day length modulated ultradian period and power, and exerted opposite effects in the light and dark phases of the 24 h day, underscoring the importance of evaluating ultradian rhythms with attention to circadian phase. Sex differences in ultradian rhythms were more prominent at night and depended on gonadal hormones in male mice. Thus, relatively straightforward modifications to the wavelet procedure allowed quantification of ultradian rhythms with appropriate time-frequency resolution, generating accurate, and repeatable measures of period and power which are suitable for group-level analyses. These analytical tools may afford deeper understanding of how ultradian rhythms are generated and respond to interoceptive and exteroceptive cues.</p>","PeriodicalId":15056,"journal":{"name":"Journal of Biological Rhythms","volume":null,"pages":null},"PeriodicalIF":2.9000,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11024927/pdf/","citationCount":"0","resultStr":"{\"title\":\"Modified Wavelet Analyses Permit Quantification of Dynamic Interactions Between Ultradian and Circadian Rhythms.\",\"authors\":\"Jonathan P Riggle, Leslie M Kay, Kenneth G Onishi, David T Falk, Benjamin L Smarr, Irving Zucker, Brian J Prendergast\",\"doi\":\"10.1177/07487304221128652\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Circadian rhythms provide daily temporal structure to cellular and organismal biological processes, ranging from gene expression to cognition. Higher-frequency (intradaily) ultradian rhythms are similarly ubiquitous but have garnered far less empirical study, in part because of the properties that define them-multimodal periods, non-stationarity, circadian harmonics, and diurnal modulation-pose challenges to their accurate and precise quantification. Wavelet analyses are ideally suited to address these challenges, but wavelet-based measurement of ultradian rhythms has remained largely idiographic. Here, we describe novel analytical approaches, based on discrete and continuous wavelet transforms, which permit quantification of rhythmic power distribution across a broad ultradian spectrum, as well as precise identification of period within empirically determined ultradian bands. Moreover, the aggregation of normalized wavelet matrices allows group-level analyses of experimental treatments, thereby circumventing limitations of idiographic approaches. The accuracy and precision of these wavelet analyses were validated using <i>in silico</i> and <i>in vivo</i> models with known ultradian features. Experiments in male and female mice yielded robust and repeatable measures of ultradian period and power in home cage locomotor activity, confirming and extending reports of ultradian rhythm modulation by sex, gonadal hormones, and circadian entrainment. Seasonal changes in day length modulated ultradian period and power, and exerted opposite effects in the light and dark phases of the 24 h day, underscoring the importance of evaluating ultradian rhythms with attention to circadian phase. Sex differences in ultradian rhythms were more prominent at night and depended on gonadal hormones in male mice. Thus, relatively straightforward modifications to the wavelet procedure allowed quantification of ultradian rhythms with appropriate time-frequency resolution, generating accurate, and repeatable measures of period and power which are suitable for group-level analyses. These analytical tools may afford deeper understanding of how ultradian rhythms are generated and respond to interoceptive and exteroceptive cues.</p>\",\"PeriodicalId\":15056,\"journal\":{\"name\":\"Journal of Biological Rhythms\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2022-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11024927/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Biological Rhythms\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1177/07487304221128652\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2022/11/15 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q2\",\"JCRName\":\"BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biological Rhythms","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1177/07487304221128652","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2022/11/15 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

昼夜节律为细胞和生物体的生物过程(从基因表达到认知)提供了每日的时间结构。高频(日内)超昼夜节律同样无处不在,但获得的实证研究却少得多,部分原因是定义超昼夜节律的特性--多模态周期、非稳态、昼夜谐波和昼夜调制--对其准确和精确量化提出了挑战。小波分析是应对这些挑战的理想方法,但基于小波的超昼夜节律测量在很大程度上仍是痴人说梦。在此,我们介绍了基于离散和连续小波变换的新型分析方法,这种方法可以量化广泛的超昼夜频谱中的节律功率分布,并精确识别经验确定的超昼夜频带内的周期。此外,归一化小波矩阵的聚合允许对实验处理进行组级分析,从而规避了特异性方法的局限性。这些小波分析的准确性和精确性已通过具有已知昼夜节律特征的硅学和体内模型进行了验证。在雄性和雌性小鼠身上进行的实验对家笼运动活动中的昼夜节律周期和功率进行了稳健且可重复的测量,证实并扩展了有关昼夜节律受性别、性腺激素和昼夜节律调节的报道。昼夜长短的季节性变化调节了超昼夜节律的周期和功率,并在一天 24 小时的明暗阶段产生了相反的影响,这强调了在评估超昼夜节律时关注昼夜相位的重要性。超昼夜节律的性别差异在夜间更为突出,并且取决于雄性小鼠的性腺激素。因此,通过对小波程序进行相对简单的修改,就能以适当的时频分辨率对超昼夜节律进行量化,从而产生准确、可重复的周期和功率测量值,并适用于群体水平的分析。这些分析工具可以让我们更深入地了解超昼夜节律是如何产生的,以及如何对内感知和外感知线索做出反应。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Modified Wavelet Analyses Permit Quantification of Dynamic Interactions Between Ultradian and Circadian Rhythms.

Circadian rhythms provide daily temporal structure to cellular and organismal biological processes, ranging from gene expression to cognition. Higher-frequency (intradaily) ultradian rhythms are similarly ubiquitous but have garnered far less empirical study, in part because of the properties that define them-multimodal periods, non-stationarity, circadian harmonics, and diurnal modulation-pose challenges to their accurate and precise quantification. Wavelet analyses are ideally suited to address these challenges, but wavelet-based measurement of ultradian rhythms has remained largely idiographic. Here, we describe novel analytical approaches, based on discrete and continuous wavelet transforms, which permit quantification of rhythmic power distribution across a broad ultradian spectrum, as well as precise identification of period within empirically determined ultradian bands. Moreover, the aggregation of normalized wavelet matrices allows group-level analyses of experimental treatments, thereby circumventing limitations of idiographic approaches. The accuracy and precision of these wavelet analyses were validated using in silico and in vivo models with known ultradian features. Experiments in male and female mice yielded robust and repeatable measures of ultradian period and power in home cage locomotor activity, confirming and extending reports of ultradian rhythm modulation by sex, gonadal hormones, and circadian entrainment. Seasonal changes in day length modulated ultradian period and power, and exerted opposite effects in the light and dark phases of the 24 h day, underscoring the importance of evaluating ultradian rhythms with attention to circadian phase. Sex differences in ultradian rhythms were more prominent at night and depended on gonadal hormones in male mice. Thus, relatively straightforward modifications to the wavelet procedure allowed quantification of ultradian rhythms with appropriate time-frequency resolution, generating accurate, and repeatable measures of period and power which are suitable for group-level analyses. These analytical tools may afford deeper understanding of how ultradian rhythms are generated and respond to interoceptive and exteroceptive cues.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
6.10
自引率
8.60%
发文量
48
审稿时长
>12 weeks
期刊介绍: Journal of Biological Rhythms is the official journal of the Society for Research on Biological Rhythms and offers peer-reviewed original research in all aspects of biological rhythms, using genetic, biochemical, physiological, behavioral, epidemiological & modeling approaches, as well as clinical trials. Emphasis is on circadian and seasonal rhythms, but timely reviews and research on other periodicities are also considered. The journal is a member of the Committee on Publication Ethics (COPE).
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信