印度东北部濒危药用兰花石斛的叶绿体基因组序列注释。

Devendra Biswal, Ruchishree Konhar, Manish Debnath, Sriram Parameswaran, Durai Sundar, Pramod Tandon
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引用次数: 3

摘要

兰科是被子植物中最大的科之一。由于兰花在植物生物学中的重要意义、市场需求和目前的可持续技术水平,对兰花生物学的基础研究及其在兰花产业中的应用日益增多。尽管叶绿体(cp)基因组继续提供进化信息,但公共数据库中关于兰花叶绿体基因组的信息非常有限。本文报道了来自印度东北部的石斛(Dendrobium nobile)的cp全基因组序列(GenBank登录号为KX377961),为今后兰花基因组学和进化研究以及兰花药用价值的研究提供了有价值的信息。采用贝叶斯方法进行系统发育分析,发现所有石斛属(D. nobile、D. hooshanense、D. officinale、D. pendulum、D. strongylanthum和D. chrysotoxum)属单系类群。兰科4个亚科的代表性种(杓兰科、花兰科、兰科和香兰科)之间的亲缘关系基本一致。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Chloroplast Genome Sequence Annotation of <i>Dendrobium nobile</i> (Asparagales: Orchidaceae), an Endangered Medicinal Orchid from Northeast India.

Chloroplast Genome Sequence Annotation of <i>Dendrobium nobile</i> (Asparagales: Orchidaceae), an Endangered Medicinal Orchid from Northeast India.

Chloroplast Genome Sequence Annotation of <i>Dendrobium nobile</i> (Asparagales: Orchidaceae), an Endangered Medicinal Orchid from Northeast India.

Chloroplast Genome Sequence Annotation of Dendrobium nobile (Asparagales: Orchidaceae), an Endangered Medicinal Orchid from Northeast India.

Orchidaceae constitutes one of the largest families of angiosperms. Owing to the significance of orchids in plant biology, market needs and current sustainable technology levels, basic research on the biology of orchids and their applications in the orchid industry is increasing. Although chloroplast (cp) genomes continue to be evolutionarily informative, there is very limited information available on orchid chloroplast genomes in public repositories. Here, we report the complete cp genome sequence of Dendrobium nobile from Northeast India (Orchidaceae, Asparagales), bearing the GenBank accession number KX377961, which will provide valuable information for future research on orchid genomics and evolution, as well as the medicinal value of orchids. Phylogenetic analyses using Bayesian methods recovered a monophyletic grouping of all Dendrobium species (D. nobile, D. huoshanense, D. officinale, D. pendulum, D. strongylanthum and D. chrysotoxum). The relationships recovered among the representative orchid species from the four subfamilies, i.e., Cypripedioideae, Epidendroideae, Orchidoideae and Vanilloideae, were consistent within the family Orchidaceae.

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