{"title":"反阴离子呈现的弱相互作用扰动酪氨酸酶模拟过氧化二铜的稳定性(II)活性位点:解开的计算指标","authors":"Sumangla Arora, Dr. Puneet Gupta","doi":"10.1002/asia.202300688","DOIUrl":null,"url":null,"abstract":"<p>It has been observed in literature that the stability of tyrosinase-mimicked μ-η<sup>2</sup>:η<sup>2</sup>-peroxo-dicopper(II) (<b>P</b>) can be perturbed in presence of counter-anions (<b>CA</b>s) such as PhCO<sub>2</sub><sup>−</sup>, CF<sub>3</sub>SO<sub>3</sub><sup>−</sup>, TsO<sup>−</sup> and SbF<sub>6</sub><sup>−</sup>. In this work, we unravel computational indicators using density functional theory to screen and study the stability of <b>P</b> in experimentally-reported cases. These indicators are Gibbs energies, geometrical parameters such as distances and angles, independent gradient model based on Hirshfeld partition (IGMH) generated data, orbitals’ overlap, and distortion-interaction (DI) energies. Our DFT computed Gibbs energies indicate that <b>P</b> is stable in case of PhCO<sub>2</sub><sup>−</sup> and TsO<sup>−</sup>. CF<sub>3</sub>SO<sub>3</sub><sup>−</sup> allows <b>P</b> and its isoelectronic species bis-μ-oxo-dicopper (<b>O</b>) to coexist. SbF<sub>6</sub><sup>−</sup> shows that <b>O</b> is in excess. Our indicators reveal that the stability of <b>P</b> in case of PhCO<sub>2</sub><sup>−</sup> and TsO<sup>−</sup> is due to the better placing of <b>P</b> and its <b>CA</b>, thus leading to better interactions and overlap of orbitals. Other indicator displays that the plane of Cu<sub>2</sub>O<sub>2</sub> core in <b>P</b> is more bend in PhCO<sub>2</sub><sup>−</sup> and TsO<sup>−</sup> cases as compared to the plane in the other two cases. In addition, the IGMH-based indicator displays higher values in the case of PhCO<sub>2</sub><sup>−</sup> and TsO<sup>−</sup> than the other <b>CA</b>s.</p>","PeriodicalId":145,"journal":{"name":"Chemistry - An Asian Journal","volume":"18 20","pages":""},"PeriodicalIF":3.5000,"publicationDate":"2023-09-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Counter-Anions Rendered Weak-Interactions Perturb the Stability of Tyrosinase-Mimicked Peroxo-Dicopper(II) Active Site: Unraveling Computational Indicators\",\"authors\":\"Sumangla Arora, Dr. Puneet Gupta\",\"doi\":\"10.1002/asia.202300688\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>It has been observed in literature that the stability of tyrosinase-mimicked μ-η<sup>2</sup>:η<sup>2</sup>-peroxo-dicopper(II) (<b>P</b>) can be perturbed in presence of counter-anions (<b>CA</b>s) such as PhCO<sub>2</sub><sup>−</sup>, CF<sub>3</sub>SO<sub>3</sub><sup>−</sup>, TsO<sup>−</sup> and SbF<sub>6</sub><sup>−</sup>. In this work, we unravel computational indicators using density functional theory to screen and study the stability of <b>P</b> in experimentally-reported cases. These indicators are Gibbs energies, geometrical parameters such as distances and angles, independent gradient model based on Hirshfeld partition (IGMH) generated data, orbitals’ overlap, and distortion-interaction (DI) energies. Our DFT computed Gibbs energies indicate that <b>P</b> is stable in case of PhCO<sub>2</sub><sup>−</sup> and TsO<sup>−</sup>. CF<sub>3</sub>SO<sub>3</sub><sup>−</sup> allows <b>P</b> and its isoelectronic species bis-μ-oxo-dicopper (<b>O</b>) to coexist. SbF<sub>6</sub><sup>−</sup> shows that <b>O</b> is in excess. Our indicators reveal that the stability of <b>P</b> in case of PhCO<sub>2</sub><sup>−</sup> and TsO<sup>−</sup> is due to the better placing of <b>P</b> and its <b>CA</b>, thus leading to better interactions and overlap of orbitals. Other indicator displays that the plane of Cu<sub>2</sub>O<sub>2</sub> core in <b>P</b> is more bend in PhCO<sub>2</sub><sup>−</sup> and TsO<sup>−</sup> cases as compared to the plane in the other two cases. In addition, the IGMH-based indicator displays higher values in the case of PhCO<sub>2</sub><sup>−</sup> and TsO<sup>−</sup> than the other <b>CA</b>s.</p>\",\"PeriodicalId\":145,\"journal\":{\"name\":\"Chemistry - An Asian Journal\",\"volume\":\"18 20\",\"pages\":\"\"},\"PeriodicalIF\":3.5000,\"publicationDate\":\"2023-09-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Chemistry - An Asian Journal\",\"FirstCategoryId\":\"1\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/asia.202300688\",\"RegionNum\":3,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Chemistry - An Asian Journal","FirstCategoryId":"1","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/asia.202300688","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
Counter-Anions Rendered Weak-Interactions Perturb the Stability of Tyrosinase-Mimicked Peroxo-Dicopper(II) Active Site: Unraveling Computational Indicators
It has been observed in literature that the stability of tyrosinase-mimicked μ-η2:η2-peroxo-dicopper(II) (P) can be perturbed in presence of counter-anions (CAs) such as PhCO2−, CF3SO3−, TsO− and SbF6−. In this work, we unravel computational indicators using density functional theory to screen and study the stability of P in experimentally-reported cases. These indicators are Gibbs energies, geometrical parameters such as distances and angles, independent gradient model based on Hirshfeld partition (IGMH) generated data, orbitals’ overlap, and distortion-interaction (DI) energies. Our DFT computed Gibbs energies indicate that P is stable in case of PhCO2− and TsO−. CF3SO3− allows P and its isoelectronic species bis-μ-oxo-dicopper (O) to coexist. SbF6− shows that O is in excess. Our indicators reveal that the stability of P in case of PhCO2− and TsO− is due to the better placing of P and its CA, thus leading to better interactions and overlap of orbitals. Other indicator displays that the plane of Cu2O2 core in P is more bend in PhCO2− and TsO− cases as compared to the plane in the other two cases. In addition, the IGMH-based indicator displays higher values in the case of PhCO2− and TsO− than the other CAs.
期刊介绍:
Chemistry—An Asian Journal is an international high-impact journal for chemistry in its broadest sense. The journal covers all aspects of chemistry from biochemistry through organic and inorganic chemistry to physical chemistry, including interdisciplinary topics.
Chemistry—An Asian Journal publishes Full Papers, Communications, and Focus Reviews.
A professional editorial team headed by Dr. Theresa Kueckmann and an Editorial Board (headed by Professor Susumu Kitagawa) ensure the highest quality of the peer-review process, the contents and the production of the journal.
Chemistry—An Asian Journal is published on behalf of the Asian Chemical Editorial Society (ACES), an association of numerous Asian chemical societies, and supported by the Gesellschaft Deutscher Chemiker (GDCh, German Chemical Society), ChemPubSoc Europe, and the Federation of Asian Chemical Societies (FACS).