单链纳米颗粒的序列模式、形态和分散性:来自模拟和机器学习的见解

IF 4.7 Q1 POLYMER SCIENCE
Roshan A. Patel, Sophia Colmenares and Michael A. Webb*, 
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引用次数: 0

摘要

单链纳米颗粒(SCNP)是一种有趣的材料,其灵感来源于蛋白质,该蛋白质由坍塌成稳定结构的单个前体聚合物链组成。在许多潜在的应用中,如催化,单链纳米颗粒的效用将复杂地取决于主要特定结构或形态的形成。然而,如何可靠地控制单链纳米颗粒的形态通常还不太清楚。为了解决这一知识差距,我们模拟了由前体链形成7680个不同的单链纳米颗粒,这些前体链原则上跨越了交联部分的广泛可调图案化特性。通过结合分子模拟和机器学习分析,我们展示了交联部分的官能化和嵌段性的总体分数如何影响某些局部和全局形态特征的形成。重要的是,我们说明并量化了由于定义明确的序列以及对应于给定前体参数规范的序列集合的坍塌的随机性质而产生的形态的分散性。此外,我们还研究了精确序列控制在前体参数的不同状态下实现形态结果的功效。总的来说,这项工作批判性地评估了如何可行地定制前体链以实现给定的SCNP形态,并为未来基于序列的设计提供了一个平台。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Sequence Patterning, Morphology, and Dispersity in Single-Chain Nanoparticles: Insights from Simulation and Machine Learning

Sequence Patterning, Morphology, and Dispersity in Single-Chain Nanoparticles: Insights from Simulation and Machine Learning

Single-chain nanoparticles (SCNPs) are intriguing materials inspired by proteins that consist of a single precursor polymer chain that has collapsed into a stable structure. In many prospective applications, such as catalysis, the utility of a single-chain nanoparticle will intricately depend on the formation of a mostly specific structure or morphology. However, it is not generally well understood how to reliably control the morphology of single-chain nanoparticles. To address this knowledge gap, we simulate the formation of 7680 distinct single-chain nanoparticles from precursor chains that span a wide range of, in principle, tunable patterning characteristics of cross-linking moieties. Using a combination of molecular simulation and machine learning analyses, we show how the overall fraction of functionalization and blockiness of cross-linking moieties biases the formation of certain local and global morphological characteristics. Importantly, we illustrate and quantify the dispersity of morphologies that arise due to the stochastic nature of collapse from a well-defined sequence as well as from the ensemble of sequences that correspond to a given specification of precursor parameters. Moreover, we also examine the efficacy of precise sequence control in achieving morphological outcomes in different regimes of precursor parameters. Overall, this work critically assesses how precursor chains might be feasibly tailored to achieve given SCNP morphologies and provides a platform to pursue future sequence-based design.

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