免疫原性细胞死亡相关特征预测胃腺癌的预后和免疫治疗反应。

IF 6.1 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Zitao Liu, Liang Sun, Xingyu Peng, Sicheng Liu, Zhengming Zhu, Chao Huang
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引用次数: 0

摘要

免疫原性细胞死亡(ICD)是一种特殊类型的调节性细胞死亡,可诱导对死亡细胞抗原的适应性免疫。ICD因其在肿瘤微环境重编程和免疫治疗中的潜在作用而受到越来越多的关注。然而,ICD相关特征与胃腺癌(STAD)预后、免疫细胞浸润和免疫治疗之间的关系尚不清楚。通过一致性聚类将患者分为不同的ICD相关亚型。系统评估了不同ICD相关亚型在预后、肿瘤微环境(TME)和免疫检查点表达方面的差异。此外,我们构建了ICD相关基因风险评分(ICDRS)。系统分析了ICDRS与癌症预后、TME、免疫治疗反应和药物敏感性的相关性。此外,我们通过体外实验探讨了TGM2在促进癌症进展中的作用。我们通过一致性聚类确定了三种ICD相关亚型。ICD基因在簇B中高度表达。与其他两种亚型相比,簇B具有更好的预后、更高的免疫反应信号活性、大量免疫细胞浸润和更低的肿瘤纯度。免疫检查点(ICP)和人类白细胞抗原(HLA)相关基因也在B簇中高表达。此外,我们发现ICDRS是预测STAD预后和免疫效果的有效指标。低ICDRS组具有预后良好、肿瘤突变负荷(TMB)高、微卫星不稳定性(MSI)高、对免疫治疗敏感的特点,而高ICDRS组易发生免疫逃逸和免疫治疗耐药性。此外,我们通过体外实验发现,下调TGM2基因可以抑制癌症细胞的增殖和迁移。我们的研究发现,基于ICD特征的模型有助于阐明STAD的TME特征,对评估STAD患者的预后和免疫治疗反应具有重要的临床意义。TGM2在STAD的进展中起着重要作用,提示TGM2可作为治疗STAD的新靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

An immunogenic cell death-related signature predicts prognosis and immunotherapy response in stomach adenocarcinoma

An immunogenic cell death-related signature predicts prognosis and immunotherapy response in stomach adenocarcinoma

The immunogenic cell death (ICD) is a specific type of regulatory cell death (RCD), which induces adaptive immunity against antigens of dead cells. ICDs have received increasing attention for their potential role in tumor microenvironment reprogramming and immunotherapy. However, the relationship between ICD-related features and stomach adenocarcinoma (STAD) prognosis, immune cell infiltration and immunotherapy remains unclear. Patients were divided into different ICD-related subtypes by consensus clustering. The differences in prognosis, Tumor microenvironment (TME), and immune checkpoint expression between different ICD-related subtypes were systematically assessed. Additionally, we constructed an ICD-related gene risk score (ICDRS). We systematically analyzed the correlation between ICDRS and prognosis, TME, immunotherapy response and drug sensitivity of gastric cancer. In addition, we explored the role of TGM2 in promoting gastric cancer progression through in vitro experiments. We identified three ICD-associated subtypes by consensus clustering. The ICD gene was highly expressed in Cluster B. Compared with the other two subtypes, Cluster B had better prognosis, higher immune response signaling activity, massive immune cell infiltration and lower tumor purity. Immune checkpoint (ICP) and human leukocyte antigen (HLA) related genes were also highly expressed in Cluster B. In addition, we found that ICDRS is an effective indicator for predicting the prognosis and immune efficacy of STAD. The low ICDRS group has the characteristics of good prognosis, high tumor mutation burden (TMB), high microsatellite instability (MSI), and sensitivity to immunotherapy, while the high ICDRS group is prone to immune escape and immunotherapy resistance. In addition, we found that down-regulating TGM2 gene can inhibit the proliferation and migration of gastric cancer cells through in vitro experiments. Our study found that the model based on ICD features is helpful to clarify the TME characteristics of STAD, and has important clinical significance for evaluating the prognosis and immunotherapy response of STAD patients. TGM2 plays an important role in the progression of STAD, suggesting that TGM2 can be used as a new target for the treatment of STAD.

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来源期刊
Apoptosis
Apoptosis 生物-生化与分子生物学
CiteScore
9.10
自引率
4.20%
发文量
85
审稿时长
1 months
期刊介绍: Apoptosis, a monthly international peer-reviewed journal, focuses on the rapid publication of innovative investigations into programmed cell death. The journal aims to stimulate research on the mechanisms and role of apoptosis in various human diseases, such as cancer, autoimmune disease, viral infection, AIDS, cardiovascular disease, neurodegenerative disorders, osteoporosis, and aging. The Editor-In-Chief acknowledges the importance of advancing clinical therapies for apoptosis-related diseases. Apoptosis considers Original Articles, Reviews, Short Communications, Letters to the Editor, and Book Reviews for publication.
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