Non-coding RNAs and functional RNA elements in Thermus thermophilus.

IF 0.8 4区生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY

Journal of General and Applied Microbiology Pub Date : 2023-11-15 Epub Date: 2023-06-02 DOI:10.2323/jgam.2023.05.001

Gota Kawai, Gen-Ichi Sampei, Makoto Nishiyama, Yoshitaka Bessho

引用次数: 1

Abstract

To complete the ThermusQ database, small non-coding RNAs (ncRNAs) and functional RNA elements found in Thermus thermophilus were summarized with annotations. The well-known three ncRNAs, M1 RNA, tmRNA and SRP RNA, were annotated as ttj8_nc001 to ttj8_nc003, and 10 novel RNAs were annotated as ttj8_nc004 to ttj8_nc013. Antisense RNAs for some ORFs were annotated as ttj8_EST00001 to ttj8_EST00006. In addition, a set of conserved sequences found in T. thermophilus HB27 were also described.

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嗜热热菌中的非编码RNA和功能性RNA元件。

为了完善ThermusQ数据库，我们对在嗜热热菌中发现的小非编码RNA (ncRNAs)和功能性RNA元件进行了总结和注释。已知的3种ncRNAs (M1 RNA、tmRNA和SRP RNA)被标注为ttj8_nc001至ttj8_nc003, 10种新型RNA被标注为ttj8_nc004至ttj8_nc013。部分orf的反义rna注释为ttj8_EST00001 ~ ttj8_EST00006。此外，还报道了在嗜热T. HB27中发现的一组保守序列。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

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来源期刊

Journal of General and Applied Microbiology 生物-生物工程与应用微生物

CiteScore

2.40

自引率

0.00%

发文量

审稿时长

6-12 weeks

期刊介绍： JGAM is going to publish scientific reports containing novel and significant microbiological findings, which are mainly devoted to the following categories: Antibiotics and Secondary Metabolites; Biotechnology and Metabolic Engineering; Developmental Microbiology; Environmental Microbiology and Bioremediation; Enzymology; Eukaryotic Microbiology; Evolution and Phylogenetics; Genome Integrity and Plasticity; Microalgae and Photosynthesis; Microbiology for Food; Molecular Genetics; Physiology and Cell Surface; Synthetic and Systems Microbiology.