Complete degradation of di-n-butyl phthalate by Glutamicibacter sp. strain 0426 with a novel pathway

IF 3.1 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Chongyang Ren, Yiying Wang, Yanan Wu, He-Ping Zhao, Li Li
{"title":"Complete degradation of di-n-butyl phthalate by Glutamicibacter sp. strain 0426 with a novel pathway","authors":"Chongyang Ren,&nbsp;Yiying Wang,&nbsp;Yanan Wu,&nbsp;He-Ping Zhao,&nbsp;Li Li","doi":"10.1007/s10532-023-10032-7","DOIUrl":null,"url":null,"abstract":"<div><p>Di-<i>n</i>-butyl phthalate (DBP) is widely used as plasticizer that has potential carcinogenic, teratogenic, and endocrine effects. In the present study, an efficient DBP-degrading bacterial strain 0426 was isolated and identified as a <i>Glutamicibacter</i> sp. strain 0426. It can utilize DBP as the sole source of carbon and energy and completely degraded 300 mg/L of DBP within 12 h. The optimal conditions (pH 6.9 and 31.7 °C) for DBP degradation were determined by response surface methodology and DBP degradation well fitted with the first-order kinetics. Bioaugmentation of contaminated soil with strain 0426 enhanced DBP (1 mg/g soil) degradation, indicating the application potential of strain 0426 for environment DBP removal. Strain 0426 harbors a distinctive DBP hydrolysis mechanism with two parallel benzoate metabolic pathways, which may account for the remarkable performance of DBP degradation. Sequences alignment has shown that an alpha/beta fold hydrolase (WP_083586847.1) contained a conserved catalytic triad and pentapeptide motif (GX1SX2G), of which function is similar to phthalic acid ester (PAEs) hydrolases and lipases that can efficiently catalyze hydrolysis of water-insoluble substrates. Furthermore, phthalic acid was converted to benzoate by decarboxylation, which entered into two different pathways: one is the protocatechuic acid pathway under the role of <i>pca</i> cluster, and the other is the catechol pathway. This study demonstrates a novel DBP degradation pathway, which broadens our understanding of the mechanisms of PAE biodegradation.</p></div>","PeriodicalId":486,"journal":{"name":"Biodegradation","volume":"35 1","pages":"87 - 99"},"PeriodicalIF":3.1000,"publicationDate":"2023-07-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biodegradation","FirstCategoryId":"5","ListUrlMain":"https://link.springer.com/article/10.1007/s10532-023-10032-7","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Di-n-butyl phthalate (DBP) is widely used as plasticizer that has potential carcinogenic, teratogenic, and endocrine effects. In the present study, an efficient DBP-degrading bacterial strain 0426 was isolated and identified as a Glutamicibacter sp. strain 0426. It can utilize DBP as the sole source of carbon and energy and completely degraded 300 mg/L of DBP within 12 h. The optimal conditions (pH 6.9 and 31.7 °C) for DBP degradation were determined by response surface methodology and DBP degradation well fitted with the first-order kinetics. Bioaugmentation of contaminated soil with strain 0426 enhanced DBP (1 mg/g soil) degradation, indicating the application potential of strain 0426 for environment DBP removal. Strain 0426 harbors a distinctive DBP hydrolysis mechanism with two parallel benzoate metabolic pathways, which may account for the remarkable performance of DBP degradation. Sequences alignment has shown that an alpha/beta fold hydrolase (WP_083586847.1) contained a conserved catalytic triad and pentapeptide motif (GX1SX2G), of which function is similar to phthalic acid ester (PAEs) hydrolases and lipases that can efficiently catalyze hydrolysis of water-insoluble substrates. Furthermore, phthalic acid was converted to benzoate by decarboxylation, which entered into two different pathways: one is the protocatechuic acid pathway under the role of pca cluster, and the other is the catechol pathway. This study demonstrates a novel DBP degradation pathway, which broadens our understanding of the mechanisms of PAE biodegradation.

Abstract Image

Abstract Image

用新型途径完全降解邻苯二甲酸二正丁酯的 Glutamicibacter sp.
邻苯二甲酸二正丁酯(DBP)被广泛用作增塑剂,具有潜在的致癌、致畸和影响内分泌的作用。本研究分离并鉴定了一种高效降解 DBP 的细菌菌株 0426,即 Glutamicibacter sp.通过响应面方法确定了降解 DBP 的最佳条件(pH 6.9 和 31.7 °C),DBP 降解与一阶动力学非常吻合。用菌株 0426 对污染土壤进行生物增殖可增强 DBP(1 毫克/克土壤)的降解,这表明菌株 0426 在去除环境 DBP 方面具有应用潜力。菌株 0426 具有独特的 DBP 水解机制,有两条并行的苯甲酸盐代谢途径,这可能是其降解 DBP 性能显著的原因。序列比对结果表明,α/β折叠水解酶(WP_083586847.1)含有保守的催化三元组和五肽基(GX1SX2G),其功能与邻苯二甲酸酯(PAEs)水解酶和脂肪酶相似,可有效催化水不溶性底物的水解。此外,邻苯二甲酸经脱羧转化为苯甲酸,进入两条不同的途径:一条是在 pca 簇作用下的原儿茶酸途径,另一条是儿茶酚途径。这项研究展示了一种新的 DBP 降解途径,拓宽了我们对 PAE 生物降解机理的认识。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Biodegradation
Biodegradation 工程技术-生物工程与应用微生物
CiteScore
5.60
自引率
0.00%
发文量
36
审稿时长
6 months
期刊介绍: Biodegradation publishes papers, reviews and mini-reviews on the biotransformation, mineralization, detoxification, recycling, amelioration or treatment of chemicals or waste materials by naturally-occurring microbial strains, microbial associations, or recombinant organisms. Coverage spans a range of topics, including Biochemistry of biodegradative pathways; Genetics of biodegradative organisms and development of recombinant biodegrading organisms; Molecular biology-based studies of biodegradative microbial communities; Enhancement of naturally-occurring biodegradative properties and activities. Also featured are novel applications of biodegradation and biotransformation technology, to soil, water, sewage, heavy metals and radionuclides, organohalogens, high-COD wastes, straight-, branched-chain and aromatic hydrocarbons; Coverage extends to design and scale-up of laboratory processes and bioreactor systems. Also offered are papers on economic and legal aspects of biological treatment of waste.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信