A data science practicum to introduce undergraduate students to bioinformatics for research

IF 1.2 4区 教育学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Bjarne Bartlett, Monica Stitt-Bergh, Michael Kantar, Jon-Paul Bingham
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引用次数: 0

Abstract

An explosion of data available in the life sciences has shifted the discipline toward genomics and quantitative data science research. Institutions of higher learning have been addressing this shift by modifying undergraduate curriculums resulting in an increasing number of bioinformatics courses and research opportunities for undergraduates. The goal of this study was to explore how a newly designed introductory bioinformatics seminar could leverage the combination of in-class instruction and independent research to build the practical skill sets of undergraduate students beginning their careers in the life sciences. Participants were surveyed to assess learning perceptions toward the dual curriculum. Most students had a neutral or positive interest in these topics before the seminar and reported increased interest after the seminar. Students had increases in confidence level in their bioinformatic proficiency and understanding of ethical principles for data/genomic science. By combining undergraduate research with directed bioinformatics skills, classroom seminars facilitated a connection between student's life sciences knowledge and emerging research tools in computational biology.

Abstract Image

数据科学实习,向本科生介绍用于研究的生物信息学。
生命科学中可用数据的激增使该学科转向基因组学和定量数据科学研究。高等院校一直在通过修改本科生课程来应对这一转变,从而为本科生提供了越来越多的生物信息学课程和研究机会。这项研究的目的是探索一个新设计的生物信息学入门研讨会如何利用课堂教学和独立研究的结合,为开始生命科学职业生涯的本科生建立实用技能。参与者被调查以评估对双重课程的学习认知。大多数学生在研讨会前对这些主题有中立或积极的兴趣,并报告在研讨会后兴趣增加。学生对他们的生物信息学能力和对数据/基因组科学伦理原则的理解的信心水平有所提高。通过将本科生研究与定向生物信息学技能相结合,课堂研讨会促进了学生生命科学知识与计算生物学新兴研究工具之间的联系。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Biochemistry and Molecular Biology Education
Biochemistry and Molecular Biology Education 生物-生化与分子生物学
CiteScore
2.60
自引率
14.30%
发文量
99
审稿时长
6-12 weeks
期刊介绍: The aim of BAMBED is to enhance teacher preparation and student learning in Biochemistry, Molecular Biology, and related sciences such as Biophysics and Cell Biology, by promoting the world-wide dissemination of educational materials. BAMBED seeks and communicates articles on many topics, including: Innovative techniques in teaching and learning. New pedagogical approaches. Research in biochemistry and molecular biology education. Reviews on emerging areas of Biochemistry and Molecular Biology to provide background for the preparation of lectures, seminars, student presentations, dissertations, etc. Historical Reviews describing "Paths to Discovery". Novel and proven laboratory experiments that have both skill-building and discovery-based characteristics. Reviews of relevant textbooks, software, and websites. Descriptions of software for educational use. Descriptions of multimedia materials such as tutorials on various aspects of biochemistry and molecular biology.
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