Federated Analysis in COINSTAC Reveals Functional Network Connectivity and Spectral Links to Smoking and Alcohol Consumption in Nearly 2,000 Adolescent Brains.

IF 2.7 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Neuroinformatics Pub Date : 2023-04-01 Epub Date: 2022-11-25 DOI:10.1007/s12021-022-09604-4
Harshvardhan Gazula, Kelly Rootes-Murdy, Bharath Holla, Sunitha Basodi, Zuo Zhang, Eric Verner, Ross Kelly, Pratima Murthy, Amit Chakrabarti, Debasish Basu, Subodh Bhagyalakshmi Nanjayya, Rajkumar Lenin Singh, Roshan Lourembam Singh, Kartik Kalyanram, Kamakshi Kartik, Kumaran Kalyanaraman, Krishnaveni Ghattu, Rebecca Kuriyan, Sunita Simon Kurpad, Gareth J Barker, Rose Dawn Bharath, Sylvane Desrivieres, Meera Purushottam, Dimitri Papadopoulos Orfanos, Eesha Sharma, Matthew Hickman, Mireille Toledano, Nilakshi Vaidya, Tobias Banaschewski, Arun L W Bokde, Herta Flor, Antoine Grigis, Hugh Garavan, Penny Gowland, Andreas Heinz, Rüdiger Brühl, Jean-Luc Martinot, Marie-Laure Paillére Martinot, Eric Artiges, Frauke Nees, Tomás Paus, Luise Poustka, Juliane H Fröhner, Lauren Robinson, Michael N Smolka, Henrik Walter, Jeanne Winterer, Robert Whelan, Jessica A Turner, Anand D Sarwate, Sergey M Plis, Vivek Benegal, Gunter Schumann, Vince D Calhoun
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引用次数: 0

Abstract

With the growth of decentralized/federated analysis approaches in neuroimaging, the opportunities to study brain disorders using data from multiple sites has grown multi-fold. One such initiative is the Neuromark, a fully automated spatially constrained independent component analysis (ICA) that is used to link brain network abnormalities among different datasets, studies, and disorders while leveraging subject-specific networks. In this study, we implement the neuromark pipeline in COINSTAC, an open-source neuroimaging framework for collaborative/decentralized analysis. Decentralized exploratory analysis of nearly 2000 resting-state functional magnetic resonance imaging datasets collected at different sites across two cohorts and co-located in different countries was performed to study the resting brain functional network connectivity changes in adolescents who smoke and consume alcohol. Results showed hypoconnectivity across the majority of networks including sensory, default mode, and subcortical domains, more for alcohol than smoking, and decreased low frequency power. These findings suggest that global reduced synchronization is associated with both tobacco and alcohol use. This proof-of-concept work demonstrates the utility and incentives associated with large-scale decentralized collaborations spanning multiple sites.

Abstract Image

COINSTAC 联合分析揭示了近 2,000 个青少年大脑的功能网络连接以及与吸烟和饮酒的频谱联系。
随着神经影像学分散/联合分析方法的发展,利用来自多个地点的数据研究脑部疾病的机会成倍增加。神经标记(Neuromark)就是其中之一,它是一种全自动空间约束独立成分分析(ICA),用于将不同数据集、研究和疾病之间的大脑网络异常联系起来,同时利用特定对象的网络。在本研究中,我们在 COINSTAC(一个用于协作/分散分析的开源神经成像框架)中实施了 neuromark 管道。我们对在不同国家的两个队列的不同地点收集的近 2000 个静息态功能磁共振成像数据集进行了分散探索性分析,以研究吸烟和饮酒青少年的静息脑功能网络连接变化。结果表明,包括感觉、默认模式和皮层下领域在内的大多数网络的连接性降低,饮酒比吸烟更明显,而且低频功率降低。这些发现表明,全球同步性降低与吸烟和饮酒都有关系。这项概念验证工作展示了跨越多个地点的大规模分散协作的效用和激励机制。
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来源期刊
Neuroinformatics
Neuroinformatics 医学-计算机:跨学科应用
CiteScore
6.00
自引率
6.70%
发文量
54
审稿时长
3 months
期刊介绍: Neuroinformatics publishes original articles and reviews with an emphasis on data structure and software tools related to analysis, modeling, integration, and sharing in all areas of neuroscience research. The editors particularly invite contributions on: (1) Theory and methodology, including discussions on ontologies, modeling approaches, database design, and meta-analyses; (2) Descriptions of developed databases and software tools, and of the methods for their distribution; (3) Relevant experimental results, such as reports accompanie by the release of massive data sets; (4) Computational simulations of models integrating and organizing complex data; and (5) Neuroengineering approaches, including hardware, robotics, and information theory studies.
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